Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1901 ATGAAGCGTTATGTTTACATTGATGATGAGGAATCATCTCATGATCTTTACTGTGATAATCGTATATCAAATAGAAAATATACTGTATTAAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGTTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCTGTCTCTGCATCAAAAGAGGCATGGGATGATTATAATAGATATCTTTCTGACAAGAAGGCAAATGAGAAGGAAGTCTGGGTTGTCAAGAAGGGCATCAAGAAACTTATCCAAGCCCAGGATATTCATGTAGGTAATATATTGTGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGGACCTCCGATCCTCAAGGAGTTTGCTACATAGAGACAGCTGCGCTGGATGGTGAAACTGATCTGAAGACACGGGTCATACCTTCTGCTTGCATGGGAATCGATGTTGAACTATTGCACAAAATTAAGGGTGTAATTGAATGTCCCAGTCCAGATAAAGACATCAGGAGATTTGATGCAAACATGCGGTTGTTCCCCCCATTTATAGATAATGATATATGCCCTTTAACCATTAAAAATACTATTCTTCAGTCATGTTACTTGAGAAACACTGAGTGGGCATGTGGAGTAGCTGTGTATACAGGTAATGAAACCAAATTGGGCATGAGTAGAGGTATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATTGACAAGTTGACTGGTGCCATATTTATATTCCAGATTGTTGTTGTTTTAGTTCTTGGTGTAGCGGGTAATGTTTGGAAGGATACAGAAGCTAAGAAGCAATGGTATGTTCTTTACCCTCATGAAGGCCCTTGGTATGAACTGTTGATCATACCTTTGCGATTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTTTGGATTTGGTGAAGAGCTTGTATGCAAAATTTATTGACTGGGACCATCAGATGATTGACCTAGAGACTAGTATTTCATCCCATGCAACTAATACTGCGATAAGTGAGGACCTGGGACAAGTTGAGTATATTTTGACTGACAAAACAGGCACCCTGACTGAGAATAAGATGATATTTAGAAGATGTTGTATTAGCGGCAATTTCTATGGAAATGAGAATGGAGATGCATTGAAAGATGTAGAGCTTCTCAATGCTGTTTCCAGTGGTTCTTCTGATGTTGTACGATTTCTTACAGTTATGGCAATCTGTAATACTGTCATTCCTACACGCAGCAAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCATGCTGCTGCTCGGTTGCACATGATTTTCTTTAATAAGAATGGAAATATTCTGGAAGTCAAGTTCAACTCTTCAATGCTTCAGTATGAAGTTCTGGAAACCTTAGAGTTCACCTCTGATAGGAAAAGAATGTCAGTAGTATTAAAAGATTGCCAAAATGGAAAGATCCTTCTCCTGTCAAAGGGAGCAGATGAGGCTATTCTTCCATATGCTCGTGCTGGGCAGCAGACCCGCCATTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGATTACGTACGCTATGTTTTGCTTGGCGTGAGTTAAAGAGAGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCCAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGTCAAAGAGTAGAACACGACTTGGAAATTCTTGGTGTAACAGCAATAGAGGATCGTTTACAGGATGGAGTTCCAGAAACAATAGAAACACTGAGAAAAGCTGGAATAAATTTTTGGATGCTAACTGGAGACAAGCAGCATACTGCAATACAAATTGCTCTGTCATGTAATTTTATTTCCCCAGAACCAAAGGGACAGCTTCTATCAATTGATGGAAAATCAGGAGATGAGGTTTGTAGAAGTTTAGAGAGAGTGCTCCGTACTATGCGGATAACTACCTCAGAACCCAAGGATGTGGCTTTTGTTATTGATGGGTGGGCACTTGAGATCGCACTTAATCATTACCGTAAAGCTTTCACTGAGCTGGCAGTTTTGTCAAGGACTGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGCTTGTACAGATCTTAAAATCATGTGATTATAGAACATTGGCCATTGGTGATGGTGGAAATGATGTAAGGATGATACAACAAGCTGATATTGGTGTGGGCATCAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCGGCTGATTATAGCATTGGAAAGTTTAGATTCCTGAAGAGATTAATTCTGGTCCATGGCCGCTACTCATATAACCGCACAGCATTTCTTTCACAGTATTCATTCTATAAATCCTTGCTGATTTGCTTCATTCAAATCTTTTTTTCATTTATTTCAGGAGTCTCTGGAACTAGCCTCTTCAATTCTGTTAGCTTGATGGCATATAATGTTTTCTACACTAGTGTTCCTGTCCTAGTCAGTGTGCTTGACAAAGATCTTGGTGAGGAAACTGTGATGCAGCATCCTCAAATTTTATTTTACTGCCAAGCAGGAAGGCTTCTAAATCCCAGTACATTTGCTGGATGGTTTGGGCGGTCTCTCTTCCATGCAATAGTTGTATTTGTAATAAGCATACATGCCTATGCTTATGATAAAAGTGAAATGGAGGAGGTTTCAATGGTTGCTCTTTCCGGCTGTATTTGGTTGCAGGCTTTTGTCGTAACAATGGAGACCAATTCCTTTACTATATTGCAACATTTTGCTATATGGGGTAATTTGGCTGCCTTTTATGCCATCAACTGGATCTTCAGTGCTCTTCCTTCATCAGGGATGTATACAATTATGTTTCGGTTGTGTCAAGAACCATCATATTGGATAGCAATTTTTCTCATGGTTGCAACCGGAATGGGTCCCATTCTAGCCATCAAATATTTTCGATATACATACAGACCGAGCAAAATCAATACACTTCAGCAAGCTGAACGTCTGGGTGGGCCAATTTTGTCACTTGGCACCATTGAGCCTCAGCCCAGATCTATAGAGAAAGACGTTTCTTCATTGTCAATAACACAACCCAAAAACAGAAATCCTGTGTATGAACCTTTGTTATCAGATTCTCCAAATGCCACGAGAAGATCTTTTGGAGCAGGAGCACCATTTGATTTTTTTCAGTCTCAGTCAAGATTATCTCTGTCTAGCTACACAAGAAATTGCAAGGATAACTGA 3321 0.402 MKRYVYIDDEESSHDLYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKLIQAQDIHVGNILWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVELLHKIKGVIECPSPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGVAGNVWKDTEAKKQWYVLYPHEGPWYELLIIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSISSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAVSSGSSDVVRFLTVMAICNTVIPTRSKTGDILYKAQSQDEDALVHAAARLHMIFFNKNGNILEVKFNSSMLQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQTRHFIEAVEQYAHLGLRTLCFAWRELKRDEYQEWSLMFKEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQHTAIQIALSCNFISPEPKGQLLSIDGKSGDEVCRSLERVLRTMRITTSEPKDVAFVIDGWALEIALNHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLGEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHFAIWGNLAAFYAINWIFSALPSSGMYTIMFRLCQEPSYWIAIFLMVATGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLGTIEPQPRSIEKDVSSLSITQPKNRNPVYEPLLSDSPNATRRSFGAGAPFDFFQSQSRLSLSSYTRNCKDN* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1901 1106 Gene3D - 75 251 - -
Apr2g1901 1106 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Apr2g1901 1106 Gene3D - 602 790 IPR023214 -
Apr2g1901 1106 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 385 1106 - -
Apr2g1901 1106 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Apr2g1901 1106 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 575 IPR023299 GO:0000166
Apr2g1901 1106 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 834 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1901 1106 Pfam E1-E2 ATPase 99 291 - -
Apr2g1901 1106 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Apr2g1901 1106 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 1016 IPR023298 -
Apr2g1901 1106 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Apr2g1901 1106 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Apr2g1901 1106 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Apr2g1901 1106 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Apr2g1901 1106 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Apr2g1901 1106 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 425 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr2g1901 1106 Gene3D - 446 591 IPR023299 GO:0000166
Apr2g1901 1106 SUPERFAMILY HAD-like 374 805 IPR036412 -
Apr2g1901 1106 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Apr2g1901 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Apr2g1901 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 385 1106 - -
Apr2g1901 1106 SFLD p-type atpase 363 801 IPR044492 -
Apr2g1901 1106 Pfam Cation transport ATPase (P-type) 436 532 - -
Apr2g1901 1106 SFLD C1.7: P-type atpase like 363 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1901 Apr-Chr2 24502921 24517519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1901 1 1106 Primary Pumps ATPases AT5G44240 85.547 0.0 2008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1901 K01530 - gmx:100786505 2105.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1901 2 24502921 24517519 Apr2g1901 2 24502921 24517519 ECH