Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1891 ATGGGGGTTGACTACTACAAGGTCCTTCAGGTCGATAGGAATGCCAAAGAAGACGACTTGAAGAAGGCTTACAGAAAGCTCGCCATGAAATGGCACCCCGACAAGAACCCCAACAGCAAAAAGGAAGCAGAATCCAAGTTCAAACAAATCTCAGAAGCCTACGAGGTGTTGAGTGATCCTCAAAAGAGAGCAATCTATGACCAATACGGTGAAGAGGGTCTGAAGGGTCAAGTGCCACCTCCTGATACTTCTTCTGGTGGAGGAACCACTTTCTTTCCCACCGGAGACATTCCAGCGTCGTTTCGGTTCAATCCCCGAAATGCTGATGATATTTTTGCTGAGTTCTTTGGCTTCTCGGACCCGTTTGGTGGGGTTACGGGAAGAAGTGGTGGTGCTGGCATGAGATCGAGCAAAACCACACAGGTGGAAGAGATCTTGACGATTAACGTCAAGCCTGGTTGGAAGAAGGGGACGAAGATCACCTTCCCAGAGAAGGGAAATGAACAGCCAAATATTTCTCTTGCTGAAGCCTTGACTGGTTACACTGTGAACCTCACTACACTGGATGGTAGAAACTTAACGTTACCAATCAACAATGTTATTCATCCTGATTACGAGGAGGTTGTTGCAAGAGAAGGAATGCCATTCCCAAAGGATCCAACAAAGAAAGGAAATCTGAGGATTAAGTTCAACATCAAATTCCCAACCCGGCTCACTTCTGACCAGAAGGCAGGAATCAAGAAACTCTTGTGTACCTGA 759 0.4664 MGVDYYKVLQVDRNAKEDDLKKAYRKLAMKWHPDKNPNSKKEAESKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDTSSGGGTTFFPTGDIPASFRFNPRNADDIFAEFFGFSDPFGGVTGRSGGAGMRSSKTTQVEEILTINVKPGWKKGTKITFPEKGNEQPNISLAEALTGYTVNLTTLDGRNLTLPINNVIHPDYEEVVAREGMPFPKDPTKKGNLRIKFNIKFPTRLTSDQKAGIKKLLCT* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1891 252 Pfam DnaJ C terminal domain 171 235 IPR002939 -
Apr2g1891 252 SUPERFAMILY Chaperone J-domain 3 73 IPR036869 -
Apr2g1891 252 CDD DnaJ 4 59 IPR001623 -
Apr2g1891 252 Gene3D DnaJ domain 3 125 IPR036869 -
Apr2g1891 252 PRINTS DnaJ domain signature 6 24 IPR001623 -
Apr2g1891 252 PRINTS DnaJ domain signature 24 39 IPR001623 -
Apr2g1891 252 PRINTS DnaJ domain signature 42 62 IPR001623 -
Apr2g1891 252 PRINTS DnaJ domain signature 62 81 IPR001623 -
Apr2g1891 252 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 172 251 - -
Apr2g1891 252 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 136 - -
Apr2g1891 252 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 136 172 - -
Apr2g1891 252 Gene3D - 129 172 - -
Apr2g1891 252 Gene3D - 173 236 - -
Apr2g1891 252 SUPERFAMILY HSP40/DnaJ peptide-binding domain 139 170 IPR008971 GO:0006457|GO:0051082
Apr2g1891 252 MobiDBLite consensus disorder prediction 72 91 - -
Apr2g1891 252 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Apr2g1891 252 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Apr2g1891 252 Pfam DnaJ domain 4 67 IPR001623 -
Apr2g1891 252 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 136 172 - -
Apr2g1891 252 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 172 251 - -
Apr2g1891 252 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 136 - -
Apr2g1891 252 SMART dnaj_3 3 62 IPR001623 -
Apr2g1891 252 SUPERFAMILY HSP40/DnaJ peptide-binding domain 171 244 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1891 Apr-Chr2 24439023 24442237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1891 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 6.47e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1891 K09510 - thj:104814512 373.244