Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1890 ATGCGAGAAACCATGCTTCTGTCTCTCTTTCTGTTTTTGTCTGTCTTTCTCTCTCCTACACCCACTCTCTCTCTAAATCAAGAGGGACTCTTCCTCCTTCAAGCCAAACACCAACTCTCCGATCCTTCCAATTCCCTCTCTGATTGGAACCACCGTGACGCCACCCCATGCAACTGGTCAGCCGTCACCTGCCAGGTCGGCACCGGCGATGTCATTTCCCTCAACCTCTCCAACCTCCAGCTCTCCGGTCCCTTCCCCACCGCCCTCTGCCGCCTCCCCTCTCTCTCCTCTCTCTCTCTGTCCTACAACAACCTCAACTCCACCCTCTCCGCCACCTCCCTTGCCGCATGCACCACCCTCCGCCACCTCGATCTCTCCCAGAACATCCTCTCCGGCACCATCCCCTCCACAATCTCCCAACTCCCCTCCCTTCTCACCCTGGACCTCTCCTTCAACAACTTCTCCGGCCAAATTCCGACAACTGTCGGCCTTTTCCGCCGTCTCGAATTTCTCTCCCTTGTTAATAACCTTCTCAACGGAACCATACCCAGTTCCCTCGGAAACATTTCCTCGCTGAAAACGCTTCACCTCGCTTACAACAACTTTTTCTCCGCGGGTCCCATTCCGAGCGAGTTAGGGAACCTCACCAACCTCGAGGAACTTTGGCTCGCGCAATGCAACCTTGTGGGCCCCATTCCTCCTTCTCTGGGAAAGTTGACTCGCCTTTCGAACCTTGACTTGTCACAGAACAAGCTCACCGGGAACATACAGGAATCGCTCGCGTCCGGGTTGCGTAGCATTGTGCAAATCGAGCTCTACCAGAACTCTCTCTCCGGCGAGTTGCCACGCTCCGGGTTCTCCAACCTTACTCAGTTGGAACGATTCGATGTCTCTACAAATGAGTTGACTGGGACGATTCCTGAGGAATTGTGCGGGTTGAAGAGGCTTGGGTCTCTGAATTTGTTCGCTAATAAACTCGAGGGTTCTCTGCCGGAGAGCATAGTAAGGTCGGAGAACTTGTACGAGCTTAAATTGTTCAACAACACGCTTAGTGGGTCGTTGCCGAGTGGTTTGGGTGGTAACTCGATGTTGCAGAGTCTTGACGTTTCGTATAACAGGTTTTCCGGCGATATTCCGGCGATTTTGTGCCGTGGGGGAGGGTTGCAGGAGCTGGTGCTGATTTACAATTCGTTTACCGGGAAAATCCCGGAGAGTCTCGGGAAATGCACGAGCTTGACGAGGGTTCGGCTTAGGAACAATAACCTTTCTGGGGTTGTTCCTGATGGCGTTTGGGGTTTGCCTCATCTGTATTTACTCGAGCTTGCTGAAAATTCTCTTTCTGGGTCAATTTCTAATTCGATTTCCGGGGCACATAACATGTCAATTTTGTTACTTTCGAGGAACCAGTTTTCTGGGTCGATTCCTGAGGCAATTGGGTCGGTGGTTAATCTTCTGGAGTTTGTTGCTAACGATAATAAACTTAGTGGTCGGATTCCGACAAGTATTGTTAAGCTGAATCAGTTGGATAGGCTTGTTCTAAGTGATAACCAGCTTTCTGGAGATCTTCCTAGCCGAATTGGTGGTTGGAAGAAGCTCAATGAACTTGCTTTAGCAAATAATAGACTTAATGGAAATGTTCCTAATGAGATAGGAGCCCTGCCAGTGCTTAATTATCTTGATCTTTCTGGCAATTGTTTTTCTGGTGATATTCCAATTGAGCTGCAGAATTTGAAGCTTAATTTGTTGAATTTGTCAAACAATCAGCTTTCTGGGGCAATCCCTCCTCTTTATGCCAATGAGAATTATAGAAAGAGTTTTCTTGGAAATCCAGGTCTGTGTAGGGATCTCTCTGGGCTATGTCCAAGCTTGGGTGAGAGTAAGAGCAGGAAGTACGTGTGGATCTTCCGGTTCATATTTGTACTTGCTGGGATTGTGTTAATTGTTGGGGTGGTTTGGTTTTACTTCAAATTCCGGGACTTCAAGAAGTTGAAAAAGGGATTTAACATTTCAAAGTGGAGGTCGTTTCATAAGCTGGGCTTTAGTGAGTTTGAGATTGTTACATTGCTGAGTGAAGATAATGTAATAGGAAGTGGTGCATCTGGGAAGGTCTACAAAGTTGCACTGAGTAATGGAGAGGTGGTGGCGGTGAAGAAATTGTGGGGAACAACTAAGATGGAAAATGGACCTGTTGGGTCTGAAAAGGATGGATTTGAAGCTGAAGTTGAAACATTGGGAAAGATACGGCACAAGAATATTGTGAGATTATGGTGTTGCTGCCACAGTGGGGATAGCAAACTCCTAGTCTATGAATACATGCCAAATGGGAGCCTTGCTGATTTGTTGCAGAGTAGCAAGAAAAACTTGTTGGATTGGCCAACAAGATATAAAATCGCTATTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATGATTGTGTACCCCCTATTGTTCATAGGGATGTCAAATCTAGCAACATCTTGCTAGATGGTGAATTTGGAGCAAAAGTTGCCGATTTTGGAGTTGCCAAAATTATTAGGGGAGTCAACCAAGGGCCAGAATCTATGTCTGTGATTGCCGGATCTTATGGTTACATTGCACCAGAATACGCTTATACTCTTAGGGTGAATGAGAAGAGTGATATTTATAGCTTTGGTGTTGTAATTTTGGAGTTGGTAACTGGGAAACCCCCTCTTGATCCAGAGTACGGGGAAAAGGATCTAGTAAAATGGGTTTCCTCAACATTGGATCAAAAAGGACAGGATCAGGTGATTGATCCCACTCTTGATTTTCAATACAGGGAAGAAATCATCAAGGTACTCAGTGTGGGGCTTCTTTGCACCACTTCTCTTCCTATAACTCGCCCTTCAATGCGTAGAGTGGTGAAAATGCTGAAGGAAGTAACTGCAGTTTCCAAATCCAAGAGTGGAAAACTCTCTCCTTATTATCAAGAAGAGGCCTCTGATAATGATCATCAGGGAACCTTAGTTTGA 2991 0.4661 MRETMLLSLFLFLSVFLSPTPTLSLNQEGLFLLQAKHQLSDPSNSLSDWNHRDATPCNWSAVTCQVGTGDVISLNLSNLQLSGPFPTALCRLPSLSSLSLSYNNLNSTLSATSLAACTTLRHLDLSQNILSGTIPSTISQLPSLLTLDLSFNNFSGQIPTTVGLFRRLEFLSLVNNLLNGTIPSSLGNISSLKTLHLAYNNFFSAGPIPSELGNLTNLEELWLAQCNLVGPIPPSLGKLTRLSNLDLSQNKLTGNIQESLASGLRSIVQIELYQNSLSGELPRSGFSNLTQLERFDVSTNELTGTIPEELCGLKRLGSLNLFANKLEGSLPESIVRSENLYELKLFNNTLSGSLPSGLGGNSMLQSLDVSYNRFSGDIPAILCRGGGLQELVLIYNSFTGKIPESLGKCTSLTRVRLRNNNLSGVVPDGVWGLPHLYLLELAENSLSGSISNSISGAHNMSILLLSRNQFSGSIPEAIGSVVNLLEFVANDNKLSGRIPTSIVKLNQLDRLVLSDNQLSGDLPSRIGGWKKLNELALANNRLNGNVPNEIGALPVLNYLDLSGNCFSGDIPIELQNLKLNLLNLSNNQLSGAIPPLYANENYRKSFLGNPGLCRDLSGLCPSLGESKSRKYVWIFRFIFVLAGIVLIVGVVWFYFKFRDFKKLKKGFNISKWRSFHKLGFSEFEIVTLLSEDNVIGSGASGKVYKVALSNGEVVAVKKLWGTTKMENGPVGSEKDGFEAEVETLGKIRHKNIVRLWCCCHSGDSKLLVYEYMPNGSLADLLQSSKKNLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSSNILLDGEFGAKVADFGVAKIIRGVNQGPESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPLDPEYGEKDLVKWVSSTLDQKGQDQVIDPTLDFQYREEIIKVLSVGLLCTTSLPITRPSMRRVVKMLKEVTAVSKSKSGKLSPYYQEEASDNDHQGTLV* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1890 996 Gene3D Phosphorylase Kinase; domain 1 671 771 - -
Apr2g1890 996 SUPERFAMILY Protein kinase-like (PK-like) 689 964 IPR011009 -
Apr2g1890 996 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Apr2g1890 996 ProSiteProfiles Protein kinase domain profile. 689 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1890 996 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 9 977 - -
Apr2g1890 996 Gene3D Transferase(Phosphotransferase) domain 1 772 986 - -
Apr2g1890 996 Gene3D Ribonuclease Inhibitor 176 264 IPR032675 -
Apr2g1890 996 Gene3D Ribonuclease Inhibitor 24 175 IPR032675 -
Apr2g1890 996 SUPERFAMILY L domain-like 37 379 - -
Apr2g1890 996 Pfam Protein kinase domain 691 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1890 996 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Apr2g1890 996 Gene3D Ribonuclease Inhibitor 265 622 IPR032675 -
Apr2g1890 996 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Apr2g1890 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Apr2g1890 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 977 - -
Apr2g1890 996 SMART serkin_6 689 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1890 996 SUPERFAMILY RNI-like 284 596 - -
Apr2g1890 996 PRINTS Leucine-rich repeat signature 120 133 - -
Apr2g1890 996 PRINTS Leucine-rich repeat signature 239 252 - -
Apr2g1890 996 SMART LRR_typ_2 92 116 IPR003591 -
Apr2g1890 996 SMART LRR_typ_2 505 529 IPR003591 -
Apr2g1890 996 SMART LRR_typ_2 239 263 IPR003591 -
Apr2g1890 996 SMART LRR_typ_2 289 313 IPR003591 -
Apr2g1890 996 SMART LRR_typ_2 141 167 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1890 Apr-Chr2 24422164 24425741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1890 21 996 Receptor kinase-like Gene Family AT1G28440 60.503 0.0 1153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr2g1890 Pkinase 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1890 - - gmx:100778128 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1890 2 24422164 24425741 Apr2g1890 2 24422164 24425741 ECH