Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1879 ATGGCACAATTACCTCCCAAGATCCCAAACATTTCACCAAGTTGGTCAGACTTCTCCTCTCACCAGAAGATGCCATTGCCACCCCTTAGCAATGGCACCACCACCAACACGAGCCATTATCAAAATCAGAACCCTTCTTGGGTAGAGTTCCTTGACTTCTCGTCCGCCAGGCGCGGCGCTCACCGGCGGACGGTGAGCGACTCCATCACCTTCATGGAGGCTCCAGTGAGGTGTGAAAATAACAATGGCAACGGTAATAACAATGACAATGAGTTTGACAAGTTTGACGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGTTCTCTGGGGTCCCCGTTCCACCAACCACCTTGTCGTCCTCTAGTCCTTCAAGCCCGTCCGATCAGAACTTCATCAATGATGAGAAACAGACCAAGCAACATAAGGAGAAGAAGGAGGAAGAGGAACATCACCATAACCAATTGAAAAATGAACCCGATGAGGTTGAAAGCCAATGCAAACAGGAAATTACACAGCCTCCAAATAACACCAATTCTTCTTCTTCCAATGACAGAATTACTGATCCCAAAAGAGTCAAAAGAATCTTGGCAAATAGGCAATCTGCGCAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTAGAACGAAGTGTAACTTCATTACAGGCCGAAGTTTCGGTGCTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTCGACAACAGCGCTCTCAAGCAAAGAATCGCCGCCCTTGCTCAGGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGACGGAGATAGATAGACTGAGGCAAGTGTATCACCAACAGAACCTGAAGAAGATGGAAAATGTTGCAGGATCACCATTACCAACCTCATCACCGAACCCTCTATTTGATGCTCAAACAGAAAAGGAACAACTTCTCAACGCTTGA 969 0.4603 MAQLPPKIPNISPSWSDFSSHQKMPLPPLSNGTTTNTSHYQNQNPSWVEFLDFSSARRGAHRRTVSDSITFMEAPVRCENNNGNGNNNDNEFDKFDDEQFMSMFTDEVVFSGVPVPPTTLSSSSPSSPSDQNFINDEKQTKQHKEKKEEEEHHHNQLKNEPDEVESQCKQEITQPPNNTNSSSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKTEIDRLRQVYHQQNLKKMENVAGSPLPTSSPNPLFDAQTEKEQLLNA* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1879 322 MobiDBLite consensus disorder prediction 292 322 - -
Apr2g1879 322 Pfam bZIP transcription factor 192 236 IPR004827 GO:0003700|GO:0006355
Apr2g1879 322 MobiDBLite consensus disorder prediction 115 135 - -
Apr2g1879 322 PANTHER BASIC LEUCINE ZIPPER 34 1 320 - -
Apr2g1879 322 MobiDBLite consensus disorder prediction 136 167 - -
Apr2g1879 322 SUPERFAMILY Leucine zipper domain 192 246 IPR046347 GO:0003700|GO:0006355
Apr2g1879 322 Coils Coil 271 291 - -
Apr2g1879 322 Gene3D - 191 263 - -
Apr2g1879 322 MobiDBLite consensus disorder prediction 168 187 - -
Apr2g1879 322 MobiDBLite consensus disorder prediction 9 41 - -
Apr2g1879 322 MobiDBLite consensus disorder prediction 115 193 - -
Apr2g1879 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Apr2g1879 322 MobiDBLite consensus disorder prediction 1 41 - -
Apr2g1879 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 242 IPR004827 GO:0003700|GO:0006355
Apr2g1879 322 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 320 - -
Apr2g1879 322 CDD bZIP_plant_RF2 193 243 IPR044759 GO:0003700|GO:0006355
Apr2g1879 322 Coils Coil 140 160 - -
Apr2g1879 322 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1879 Apr-Chr2 24341064 24344639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1879 1 269 bZIP Transcription Factor Family AT3G58120 56.949 6.31e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr2g1879 bZIP_1 3.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1879 - - gmx:100101874 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1879 2 24341064 24344639 Apr2g1879 2 24341064 24344639 ECH