Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1855 ATGGACTCCCTCGCCGGAGCTCCGCCGCACATCGTCGCACCTCTGTCGTCGCGACCGTCGCCGTTCCCCGGCCGGGAAGATTGCTGGTCGGAGGACGCCACGTTCACGCTCATCGACGCATGGGGCGAACGCTACCTCGAACTTAACCGCGGCAACCTCCGTCAGAAGCACTGGCAAGAGGTCGCCGACGCCGTCAACGCCCGCCACGGCCACGTGAGCAGCAAGGCGCACCGCACCGACGTGCAGTGCAAGAACCGAATCGACACGCTCAAAAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATGCCGGCGATTCCGCCACCGCCTGGCCGTTCTTCCTCCAACTCGATTTCCTCATCGGAGACACTTTTCCGGCGAAGAAGCCCTCGCCGCCGGCAATCACCGGCAATCGGTGGAACACTCCTCCGGCGAAGTCCCCGTCCTGGGCGCTCGTCCCGGTCGGTCCTCGATCCGGCACGCAGAAGCGGCCGGCGGGGAAGGCGACGTCGCCGGCGAGTGTGGACAATTCGTACTTCCGGCGGAATTTCTCTGCCTTTGCGGCGGCGGAAGCGGACAGTGAAAATTCGAATGGCTCGAAATGGAGCAGTGAGAGTAAAAAGAGGAGGAAGAGGAAGAGGGAATTTGGGTACAGAGATGTTGCAGAAGCGTTAGAGAGGTTTGGGGAGATATACGAAAGAGTGGAAGAAGCGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGAATGCAATTTGCTAAGGATTTGGAGTGCCAGAGGATGCAGCTCTTCATGGAAACGCAGGTTCGCTTGCAAAGAATCAATGCCTCCAAGCGTTCTTCTGCGCCTGGTTAG 858 0.5909 MDSLAGAPPHIVAPLSSRPSPFPGREDCWSEDATFTLIDAWGERYLELNRGNLRQKHWQEVADAVNARHGHVSSKAHRTDVQCKNRIDTLKKKYKIEKARVSDAGDSATAWPFFLQLDFLIGDTFPAKKPSPPAITGNRWNTPPAKSPSWALVPVGPRSGTQKRPAGKATSPASVDNSYFRRNFSAFAAAEADSENSNGSKWSSESKKRRKRKREFGYRDVAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLECQRMQLFMETQVRLQRINASKRSSAPG* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1855 285 MobiDBLite consensus disorder prediction 130 174 - -
Apr2g1855 285 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g1855 285 Gene3D - 29 96 - -
Apr2g1855 285 Pfam Myb/SANT-like DNA-binding domain 26 119 IPR044822 -
Apr2g1855 285 Coils Coil 221 252 - -
Apr2g1855 285 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 282 IPR044823 -
Apr2g1855 285 MobiDBLite consensus disorder prediction 195 214 - -
Apr2g1855 285 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 17 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1855 Apr-Chr2 24133528 24134476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1855 218 275 Trihelix Transcription Factor Family AT3G14180 50.000 6.07e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr2g1855 Myb_DNA-bind_4 1.9e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1855 - - gmx:100811154 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1855 2 24133528 24134476 Apr2g1855 2 24133528 24134476 ECH