Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1854 ATGGTTTTTCATTCCAAATATATAAGAACATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGGCCATCTAATGTGTTGTGGTGGCCATCAGATTTCGTTGAAAATTTTGGATCTGTTTCTTTGGGTTCTCAAGATGAGACCTCAAGTAATAAAGAATCTCCTAGACATTCTGTCGAAGATGTTTTGTCACCTCAGAGAGCATCACAAACTCTCTGGTGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCGACTGAAGGAACTTTTTGATGGCATTCCTACCTTGGACGAGCTTCATGCTTTGGGTGGAGAGGGTTTTAAGGCTGACATCATTCTTGTGGATTCAGAGAAAGATAAAAAACTATCCATGTTGAAGCAACTGATTGTGGCATTAGTTAGAGGATTAAACTCAAATCCAGCTGCAATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGGTCCAATGTGGAAAGTCCAGCAAAAGCTGCTTTAGATGAAACCTCTCACATGTTTGAGAATCGAGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGCCGCCCTCGAGCTATCTTATTTAAAGTGTTAGCTGATACTGTAGGTCTTGAAAGTAGGCTCGTGGTGGGCTTGCCAAATGATGGAGCTGTTGAATGTCAAGACTCATACAAGCATATGTCTGTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCAGGCCAATTATTACCACGATCAACCAAGGCAGTTCTTATGACTCACATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATTTGGGGTTTCAGAGAGGTTAGATCCTAACAGTGCTGAGAAAGAGGAAAACCTCCAATTCAATAGAAGATTTGAAGCATCTTCAAATGTAACGGGCCTTTCCTTGAGAAACATGATGTTTCGATCAAATAGCACTTTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCTTTTGGTCGGCGTAGTCGTAGAAAGGTCATTGCCGAGCAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGGACGGTCCATGCTTAGTGGTGATAGGACGTCATTTAGAGATTTTGTTGATGATCAAGCTACATCAAGATCCAGTTATAAGTCAGATGGTGCATCCTCGTCAGAAGCTCGTAGAATAAGAAGAAGAAGCATCAGCATTACACCCGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTGAAGCAAAATCGTCTTCTGAGAGAACGAGGGGATGATAACTCATTTTCCCATTCTCCAAACAATAGTAGTAGTGATGCAAATCTTCAGGAAAATGTGACAAATTTCCATCTTGATGGTCATGATGAAAGATCTGCGCAATATTCTTGTCAGCGTGACCAAGGAACTTCACAGAAGGCCATGTCGTTACCATCTTCACCACATGATTATAGAGTTCAAGCTTCTGAGAGAGGCGGACCATCAAGATACGGAGTGAATGATGAAATGGAATCAACTTGGAATAAAGTACTTGAATCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAGAATGGAATATTGACTTTTCTGAATTAACAGTTGGAACTCGTGTAGGGATTGGTTTCTTTGGAGAAGTCTTCCGTGGCATATGGAATGGCACAGACGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAAATATCTATACTGAGTCGGCTCCGACATCCTAATGTTATATTGTTTCTCGGTGCTTGCACAAAGCCTCCCCGCTTGTCAATGGTTACAGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGCCAAAAGAAAAAGCTTAGTTGGCGGAGAAGACTAAGAATGTTGCGTGACATATGCAAGGGTTTGATGTGCATACACCGTATGAAGATTATTCACCGTGATGTAAAAAGTGCAAATTGTCTAGTGAATAAGCATTGGACCGTGAAAATATGTGATTTTGGGCTTTCAAGAATAATAACAGACTCTCCCATGAGAGATTCTTCATCAGCTGGAACTCCAGAATGGATGGCTCCTGAGCTTATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTGTGCACCTTGAACAGACCATGGGAAGGCGTGCCACCTGAGAGGGTAGTTTATTCCGTTGCAAATGAGGGTTCCAGATTGGACATTCCAGAAGGCCCTCTAGGCAGGCTAATTTCAGACTGTTGGGCAGAATCCCATGAGCGCCCAAGTTGTGAGGAGATTCTTTCTCGTTTGGTGGACATTGAGTACTCATTGTGCTGA 2472 0.4159 MVFHSKYIRTWRRHEKMQGRQSKGHLMCCGGHQISLKILDLFLWVLKMRPQVIKNLLDILSKMFCHLREHHKLSGALECFQNQYQMVFIQSFRLKELFDGIPTLDELHALGGEGFKADIILVDSEKDKKLSMLKQLIVALVRGLNSNPAAIIKKIAGLVSDFYKRSNVESPAKAALDETSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGAVECQDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGVSERLDPNSAEKEENLQFNRRFEASSNVTGLSLRNMMFRSNSTLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSMLSGDRTSFRDFVDDQATSRSSYKSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSFSHSPNNSSSDANLQENVTNFHLDGHDERSAQYSCQRDQGTSQKAMSLPSSPHDYRVQASERGGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLRMLRDICKGLMCIHRMKIIHRDVKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVANEGSRLDIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1854 823 ProSitePatterns Protein kinases ATP-binding region signature. 573 594 IPR017441 GO:0005524
Apr2g1854 823 CDD STKc_MAP3K-like 573 815 - -
Apr2g1854 823 SUPERFAMILY Protein kinase-like (PK-like) 541 815 IPR011009 -
Apr2g1854 823 MobiDBLite consensus disorder prediction 400 415 - -
Apr2g1854 823 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 166 821 - -
Apr2g1854 823 MobiDBLite consensus disorder prediction 496 511 - -
Apr2g1854 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Apr2g1854 823 MobiDBLite consensus disorder prediction 451 476 - -
Apr2g1854 823 SMART serkin_6 567 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1854 823 MobiDBLite consensus disorder prediction 365 423 - -
Apr2g1854 823 Pfam Protein tyrosine and serine/threonine kinase 568 815 IPR001245 GO:0004672|GO:0006468
Apr2g1854 823 Gene3D Phosphorylase Kinase; domain 1 560 645 - -
Apr2g1854 823 MobiDBLite consensus disorder prediction 491 533 - -
Apr2g1854 823 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 166 821 - -
Apr2g1854 823 Gene3D Transferase(Phosphotransferase) domain 1 646 821 - -
Apr2g1854 823 Pfam Ethylene-responsive protein kinase Le-CTR1 95 260 - -
Apr2g1854 823 ProSiteProfiles Protein kinase domain profile. 567 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1854 823 MobiDBLite consensus disorder prediction 279 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1854 Apr-Chr2 24113767 24132038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1854 93 823 MAP Kinase Kinase Kinase AT3G58640 72.690 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Apr2g1854 PK_Tyr_Ser-Thr 9.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1854 - - aprc:113853840 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1854 2 24113767 24132038 Apr2g1854 2 24113767 24132038 ECH