Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1852 ATGGCTGATGAGAGAACTTGTATATCTGAAGAAGACAAGAGTGAAGGTAGCAAACCCTCTTCTCCAAGTCTTAGAAAACGTTCATTCTTTGACTTGAACGAAGAAGCTGTGGATGATGGAGATGATACAATAAGTGATGGTCCCCTCAGTAACAATGACATATCATCTCAAGAAGGTAATTTGAATAGCAATAATAACTCAAGTGATGAAGGGAAAGACCGTCCGACTACGGTTAGACAATATGTGCGTTCCAAAATGCCAAGACTCCGTTGGACTCCTGATCTCCATTTAGCTTTTGTTCATGCTGTTGAGAGGCTTGGTGGACAGGAAAGAGCAACTCCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGCCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCACAAAATAGGGCAATGCAAGGAAGGGATCATATTATGGATATGTATGAAAGATTTAATGTCTCACAACACTTTGGGGTTGATAACGGGCACTTTCTGCCATCATCTCTGCTAACAAAACAACCACCTTATGAAATCAATGATCATGGCTCTTCAAGATTACACCCGGCAGGGTTTTTCAATAGTCACATGATGATAAGATCAAGTTCGGTGTGGGACAAAGAATTATATAATTATCATTATCAACGTAGTTCCTGCACTCCTAGCTGCACCGGCCACACCAAGTTTGATGCTGAGGTTCATGATTTGAAAAATCAAATTTCAGAATTCGCAAATCAAGTTCAAGTATCAAAACAAACCTACTTCAAAGCTCAGTTAGAAAAGTTGAATGAGAAGAAAGAATCACCAAGTTTCTTGGAGCTAAAGCTAAGTCAAGATTCAGAAAAATTATCACAGATGGTGTTAATCTAA 921 0.392 MADERTCISEEDKSEGSKPSSPSLRKRSFFDLNEEAVDDGDDTISDGPLSNNDISSQEGNLNSNNNSSDEGKDRPTTVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRAMQGRDHIMDMYERFNVSQHFGVDNGHFLPSSLLTKQPPYEINDHGSSRLHPAGFFNSHMMIRSSSVWDKELYNYHYQRSSCTPSCTGHTKFDAEVHDLKNQISEFANQVQVSKQTYFKAQLEKLNEKKESPSFLELKLSQDSEKLSQMVLI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1852 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 23 294 IPR044848 GO:0003700
Apr2g1852 306 MobiDBLite consensus disorder prediction 1 78 - -
Apr2g1852 306 Gene3D - 86 143 - -
Apr2g1852 306 Pfam Myb-like DNA-binding domain 89 139 IPR001005 -
Apr2g1852 306 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g1852 306 MobiDBLite consensus disorder prediction 45 71 - -
Apr2g1852 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 142 IPR006447 GO:0003677
Apr2g1852 306 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 23 294 - -
Apr2g1852 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 143 IPR017930 -
Apr2g1852 306 SUPERFAMILY Homeodomain-like 85 141 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1852 Apr-Chr2 24094428 24100311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1852 78 210 G2-like Transcription Factor Family AT2G42660 51.429 2.46e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr2g1852 Myb_DNA-binding 4.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1852 - - gmx:102668520 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1852 2 24094428 24100311 Apr2g1852 2 24094428 24100311 ECH