Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1849 ATGGAGGAAGATGATGGGTATAGAAGGAAGGCAAAGGTTGCTCTCGTTGGTATCTTAATGGTTGCATCTATCGCTGTTTTTGCTTTGGTTGTTGCTTTCGCATACTACTGCTACATCCGCAACAAGGTCTCCAAGCTCCGCAAAAGCTTTAAAGATGCAAACCTTAATGAGAAAAGTGACTTTGCAAATCTGCAAGTTGTTGCTGAAAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTGCATTCAGCAACGGGGGGCTTCAGCAAGTCCAATGTCATTGGTCATGGCGGATTTGGACTTGTTTACCGGGGGATGCTCAATGATGGCAGGAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAATTTAAAGTAGAGGTGGAATTGCTAAGTCGGTTGCATTCTCCTTATCTGCTGGCATTGCTTGGGTACTGCTCTGATAATAATCATAAATTGCTGGTATATGAATATATGGCAAATGGTGGACTGCAGGAACATCTTTATCCTGTCAGCAATTCTAATGTTACTCCCATGAAGTTGGATTGGGAAACTCGATTAAGAGTAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTCTGTCCCCCAGTGATTCACAGGGATTTTAAGAGCAGCAACATCCTCTTGGATAAGAAATTTCATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTCGAGTTTTGGGCACCCAAGGATATGTTGCCCCTGAATATGCACTAACAGGGCATTTAACAACAAAATCAGACGTTTACAGTTATGGTGTGGTACTTTTGGAGCTGCTTACTGGCCGAGTGCCAGTTGATATGAAGAGATCACCTGGGGAAGGTGTTCTTGTTTCGTGGGCTTTGCCCCTTTTGACTGATAGAGAAAAGGTTGCAAAGATTATGGATCCTGCGTTGGAGGGACAGTACTCTATGAAAGAGGTTGTCCAGGTAGCTGCAATTGCTGCAATGTGCGTGCAACCAGAGGCGGATTATCGACCACTAATGGCAGATGTTGTGCAGTCATTGGTTCCACTGGTGAAGACTCACAGGTCCACCTCAATGGTAGGCAGCTACTCTAGTTTCCATTCCCCTAAGTTGTCCCCGGCCCAACATCAAGTTAATGCAAATATGTAA 1197 0.4411 MEEDDGYRRKAKVALVGILMVASIAVFALVVAFAYYCYIRNKVSKLRKSFKDANLNEKSDFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGMLNDGRKVAIKFMDQAGKQGEEEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEYMANGGLQEHLYPVSNSNVTPMKLDWETRLRVALEAAKGLEYLHEHVCPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRSPGEGVLVSWALPLLTDREKVAKIMDPALEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTHRSTSMVGSYSSFHSPKLSPAQHQVNANM* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1849 398 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Apr2g1849 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Apr2g1849 398 Gene3D Transferase(Phosphotransferase) domain 1 163 380 - -
Apr2g1849 398 PANTHER OS01G0750732 PROTEIN 3 394 - -
Apr2g1849 398 SUPERFAMILY Protein kinase-like (PK-like) 69 363 IPR011009 -
Apr2g1849 398 Pfam Protein kinase domain 88 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1849 398 PANTHER OS07G0227300 PROTEIN 3 394 - -
Apr2g1849 398 CDD STKc_IRAK 93 366 - -
Apr2g1849 398 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1849 398 Gene3D Phosphorylase Kinase; domain 1 47 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1849 Apr-Chr2 24070629 24074675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1849 1 389 Receptor kinase-like Gene Family AT3G58690 76.607 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Apr2g1849 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1849 - - gmx:100804893 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1849 2 24070629 24074675 Apr2g1849 2 24070629 24074675 ECH