Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1847 ATGGCCTCTATGCCGTTGGGGCCGCACCACCTTCAACCACCGCAAGTAGCAGCTCCGCCGCATCAGCAACAGCAACAACTGCCGCAAGCAGAGAATGACCCGATGAAGGTGGACGGTCGCCGTGGCTCCGACTCGACCACAGATAAGGAAATGTCCGCTCCTGTTGCTGATGGTAATGATGCAGTCACTGGTCACATAATCTCAACCACAATTGGAGGCAAAAATGGCGAACCTAAACGAACCATCAGTTACATGGCCGAACGTGTTGTTGGTACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAAACTGGAGAAGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAAAATCGTGAACTGCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCTCTGAAGCATTGTTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCCGAGACGATGTACCGAGTTATAAAGCACTACAGTAGTATGAACCAGAGAATTCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTAGCATATATCCATTCTGTACCCGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTCAAGCTTTGTGATTTTGGGAGTGCCAAAGTTCTGGTCCAGGGTGAATCAAACATTTCTTACATATGTTCGCGGTACTATCGAGCCCCAGAACTAATATTTGGTGCGACAGAATACACAACATCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTACTTCTAGGCCAGCCATTGTTCCCAGGAGAAAATCAGGTTGACCAACTTGTGGAAATTATCAAGGTTCTTGGTACCCCTACTCGAGAAGAAATTCGCTGCATGAATCCTAATTATACAGATTTCAGATTCCCCCAAATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCTATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAGTCTTCGTTGCAGTGCACTGGAAGCATTGGCACATCCTTTCTTTGATGATCTCCGAGAGCCCAATGTCCGGCTACCTAATGGTCGTCCACTGCCTCCACTTTTCAACTTTAAACAGGAATTAGCTGGAGCACCTCCTGAACTGATCTATAGACTCATCCCGGAGCACGTGAGGCGGCAAACTGGTCTTGGCTTACCATATCCGGCTGGCACTCAAATGTAA 1281 0.4582 MASMPLGPHHLQPPQVAAPPHQQQQQLPQAENDPMKVDGRRGSDSTTDKEMSAPVADGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVIKHYSSMNQRIPLIYVKLYTYQIFRGLAYIHSVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVQGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALEALAHPFFDDLREPNVRLPNGRPLPPLFNFKQELAGAPPELIYRLIPEHVRRQTGLGLPYPAGTQM* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1847 426 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 34 417 - -
Apr2g1847 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Apr2g1847 426 MobiDBLite consensus disorder prediction 17 31 - -
Apr2g1847 426 MobiDBLite consensus disorder prediction 1 60 - -
Apr2g1847 426 Pfam Protein kinase domain 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1847 426 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Apr2g1847 426 Gene3D Transferase(Phosphotransferase) domain 1 164 411 - -
Apr2g1847 426 CDD STKc_GSK3 79 371 IPR039192 -
Apr2g1847 426 PANTHER OS02G0236200 PROTEIN 34 417 - -
Apr2g1847 426 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Apr2g1847 426 SUPERFAMILY Protein kinase-like (PK-like) 83 394 IPR011009 -
Apr2g1847 426 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1847 426 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1847 Apr-Chr2 24049474 24054560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1847 76 424 MAP Kinase Gene Family AT1G73670 36.096 1.34e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Apr2g1847 Pkinase 7.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1847 K14502 - qsu:111995841 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1847 2 24049474 24054560 Apr2g1847 2 24049474 24054560 ECH