Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1844 ATGTATAACCGGAGATTCAACAGCCAACCATTATATGTGGCTGACCCAGATGAGCTCGAGCCCACCTCAGAAACTGGGCCTACTTCTCCCTCTTCCGGTGAAGACACTAAAACTGAAGCACCATCGCCAAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTAACAATACCGATCGGTGACGTGGATGGATCTAAGAACAAAGGAGAGACATATCCACCGTCTGACTCATGGGCCTGGAGGAAGTACGGTCAGAAGCCCATCAAAGGCTCCCCTTATCCAAGGGGATATTACCGATGCAGCAGTTCGAAGGGGTGTCCCGCAAGGAAGCAAGTTGAGAGAAGCCGCGTGGACCCCACAAAGCTCATTGTAACCTACGCTTACGAACACAACCATTCACTTCCACATCCAAAATCCCATTCCTCCGCCGCTTCCGCTGCCCCACGCGACGGCGCTGTTGCCTCCCCCGCCGAATCCGCCGCCAGGCTTCCGCCGGAGGATCTCACGGTGTTCGTTACCCATTCCGACCTCGAACTCGCCGGCGACTCTGCGGTTCTGCTTAGCCACCACCACCACGCCGAGTTCGGATGGTTCGATGACGTGACCTCCACTGGCGTCCTTGAAAGCCCGATCTGCGGGGAGGTGGAGGACATGGCGATGACGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGATCTCGGCGAGTTGCCGGAGTGTTCGGCGGTTTTCCGGCGAAAGAATATTCCGAGAGACAGCGCGATTCGGTGCGGCGGCATCACAGGATAA 783 0.567 MYNRRFNSQPLYVADPDELEPTSETGPTSPSSGEDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKNKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPHPKSHSSAASAAPRDGAVASPAESAARLPPEDLTVFVTHSDLELAGDSAVLLSHHHHAEFGWFDDVTSTGVLESPICGEVEDMAMTMREEDESLFADLGELPECSAVFRRKNIPRDSAIRCGGITG* 261
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1844 260 PANTHER OS01G0750100 PROTEIN 18 251 - -
Apr2g1844 260 MobiDBLite consensus disorder prediction 22 37 - -
Apr2g1844 260 SUPERFAMILY WRKY DNA-binding domain 69 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g1844 260 MobiDBLite consensus disorder prediction 132 160 - -
Apr2g1844 260 SMART WRKY_cls 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g1844 260 MobiDBLite consensus disorder prediction 1 73 - -
Apr2g1844 260 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 251 IPR044810 GO:0003700
Apr2g1844 260 Pfam WRKY DNA -binding domain 75 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g1844 260 Gene3D WRKY domain 61 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g1844 260 ProSiteProfiles WRKY domain profile. 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr2g1844 Apr-Chr2 24022298 24024692 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1844 14 247 WRKY Transcription Factor Family AT3G58710 52.049 2.25e-74 226
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g1844 WRKY 1.7e-24 CL0274