Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1841 ATGAAAAGCTATAGATACGATGTGTTCATCAGTTTCAGAGGCATTGACACTCGCAACACTTTTGTGGATCATCTCTATTCTCATCTCATTAGAAAAGGCATTTTTGCCTTCAAAGATGACCAAAGGCTCCAAAAAGGAGAACTCATTTCACCACAGCTTGAACAAGCAATTCGAGACTCTCGAGTCTCTGTAATTGTGTTCTCTCAACATTATGCTTCCTCATCGTGGTGCTTGGATGAAATGGCTGCTATTGCTCATTGCCATCAACAATTCAAACAAACCGTTTTCCCTGTTTTCTATGACGTGGATCTATCTCACGTACGAAAACAGAATGGAGTGTACGAGGATGCCTTTGCTTTACACACTCTGAAATTCAAACAAGATCCGGATAAGGTTGATCGATGGAAGAGAGCTATGACGAATTTGGGTAATTCGGTTGGTTGGGATGTGAGAGATAAGCCAGAGTTTAAAGAGATTGATAATATTGCTAAAGCAATAATTAGAGCATTGGGTCATAAATTCTCAGGGTTTGCTGATGACCTTGTTGGAATACAACCTCGTGTAAAAACATTGGAAAACCTTTTGAAACTAACCTCAAAGGACGATGGTATTCAAGTGTTAGGAATATGGGGAATGAACGGAATAGGAAAGACGACTCATGCTACTGTCTTATATAATAGAATCTCTCATCAATTTAATGCTTGTTGCTTTATTGAGAACGTAAGCAAAATTTATAAAGATGGAGATGCTGTTGCTGTACAAAGACAAATTCTTCGTCAAACTCTAGACGAAAAAAATCTAGACGCATACGGTCCTTTAGAAATATGTGGAATTATAAGAAATAGACTACATCACATAAAGGTGCTTATAGTTCTTGATAATGTTGAGGACGTACATCAACTTGAGAAATTAGCTATAAATCCTAAATTGTTACATACTGAAAGTAGAATGATCATTACTACAAGGGATAAGCATATTTTGAAAGTGTACGGAGCTCAAGCAATATATGAAGTTCCACTATTAAGTGAGAAAGATGCTCGTGAATTGTTCTGTGAAAAAGCCTTCAAAAGTCCCCCAAGTAGCAGCTGTATGGAGATGATTCCAGAAATATTAACATATGCTCAATCTCTTCCATTAGCATTAAAAGTATTGGGTTCTTTCTTGTGTACTCGTGATGCTGACCAATGGAGAGGTGCCTTGAATAGATTGAAAGAAAATCCAGATGACAGAATTATGGAGGTGCTTAAAATAAGTTTTGACGGATTAAGTCGTAAGGAAAAAGATATATTTTTACACATTGCTTGTTTCTTTAAAGGGGAGAGGAAAGATTATGTAAAACGAATTCTAGATAGCTGTGGATTATTATATAATATTGGAATTTTAATTATGGTTGAGAAATCAATGATAACCATTAAAAATGAAGAAATTCATATGCATCAAATGTTACAAGAACTCGGGAAGAAAATTGTTGATGATCAATGTGTGGACAATCCAGCAGAGCGGAGTAGATTGTGGCGTTACATGGATCTCGATGATGTTTTTGAGAGAAACACGGAAAGAAACAAAGTTGAGGCTATAGTTTTACATCAAGAAGAAAATGTGTCCATGTGGGACGCGGAAGGATTGTCGAAAATGAAGAATCTAAAACTTCTGATATTATATGATAATAGATTTGGTGGAACTCTGAATTTTCTTTCAAAGAGACTGCATTATCTATTTTGGCATGGATACCCCTTTGCTTCACTGCCATCAACTTTTAATCCCTTCTGTCTTGTGGAATTAAACATGCCTGACAGTGCCATTGAACGACTGTGGGAAGGCCCTAAGAATATGCCACTTCTGAAAAGGGTGGATTTGAGCAACTCCAAGTGTCTTATTGAGACACCAAATTTTGAAGGAAGCCTTAACATTAAGCGGCTAGATCTTACTGGTTGCACAAAGCTCTCACGACTCCATCAATCAATTGGACTTCTTGGAAACCTCACCTTCTTGAGTTTGCGAAACTGTACCAATCTGACTAGCCTAGATTTTGGTGATGATAGAGTATCTAATTTAGGGTCTTTGAGAGTCCTACATCTCTCTGGTTGCACAAAACTTGAAAGCACTCCAAATTTTAAGGTGGCCTCAAAGCTTGAGTACCTTAACATGGATGGATGTACAAGTTTATCCACTGTTCATGTATCTATTGGGGCTCTTACAAGACTTAGATTCTTGAGTTTGAGAGAGTGCACAAAACTTAAGTGTGTACCCAGCGAAATTAATACCATGGTATTTCTTACAACTCTAGATTTGTTTGGCTGCTCAGATCTTATGACATTCAACTTGAAACAAGAAAGAGATGCTGAACTAACCAATAAGGCCCAGATTCTTCCCCCCAGATCCAAGACTCGCAACTCTTCTTCCCATATGAAAGCTTTGATTTTTCTGGACTTGAGCTTTTGCAATCTAATGAAATTTCCCGATGCCATTGGAGAGTTAATGTGTTTGGAAAGACTAAATCTACAAGGAAACAAATTTTGTTCAATACCTAATACCATAAGCAAGCTATCATGTCTAGCATATTTAAACTTAGCACATTGCCGTCTTCTAGAATATCTTCCTGTGTTGCCAACAAAAAGCGCTTCATCAGTGGGAAGGTATTTCCTAACTGCATCAGGATCTCGTGATCATAGGTCAGGATTCTATGTTTTTGACTGCTTGACTGTGTTTCATTCCACGTTCAAAAGATATCAACTTCCTTGGCTGAGAAGACTACTTAAGGAACCCCGTCATTTTCGGTGTGGCTTTGACATTATTTCACGTTGTGTTGATACTAAATTTGGTAAGATTCCACCGTGGTTCAATCATAGATTTGGAGGGGATTCAATCATAAGGATAGGGCACTGTAACGAGGATGACGATTGGATTGGATTTGCCTTTTGTGTGGCATTTCAAAAAAACAATCGTTCTACTAGTTCTTCACATCATTCCACATCCTTCCCATTGCCACATCCCTTTTATCTGTCTTTTGAAAGTGAATGCACAGAAGAGCGCTTTGATATGCCACTTAATTTAGAATTGGCTAAGATCAATGGCTCAGAACATCTTTGGATAATCTTTATCTCTAGGAAGCACTGTCATTTTGTAAAAACAGAAGCACTTATCACATTTAAAGCCTGTCCAGGTTTAGTGGTGAAAGAGTGGGGGTTACGGAGGGTAGTGAAGAAAGATATAGAGAAGAATGAAGATGTAGAGGAGAATGAAATGAGGCAAGAGATACATGAAGGACGATGCTCTTCATCATCCCTTCCAGTACTTATCATTGGTAATGTAAAAAAAGATAGCAGCTTTGGACCCAAAATCCAGCTCCCCTACAATTGGTTGGTTACTGAGGAAGATGAAATTGAGAATTTTGAAGCCAAGGCAAAAGAAAATACTCTCTCTATTATGGGCCTTGAGATAGGCCAATCACAGTGA 3456 0.3796 MKSYRYDVFISFRGIDTRNTFVDHLYSHLIRKGIFAFKDDQRLQKGELISPQLEQAIRDSRVSVIVFSQHYASSSWCLDEMAAIAHCHQQFKQTVFPVFYDVDLSHVRKQNGVYEDAFALHTLKFKQDPDKVDRWKRAMTNLGNSVGWDVRDKPEFKEIDNIAKAIIRALGHKFSGFADDLVGIQPRVKTLENLLKLTSKDDGIQVLGIWGMNGIGKTTHATVLYNRISHQFNACCFIENVSKIYKDGDAVAVQRQILRQTLDEKNLDAYGPLEICGIIRNRLHHIKVLIVLDNVEDVHQLEKLAINPKLLHTESRMIITTRDKHILKVYGAQAIYEVPLLSEKDARELFCEKAFKSPPSSSCMEMIPEILTYAQSLPLALKVLGSFLCTRDADQWRGALNRLKENPDDRIMEVLKISFDGLSRKEKDIFLHIACFFKGERKDYVKRILDSCGLLYNIGILIMVEKSMITIKNEEIHMHQMLQELGKKIVDDQCVDNPAERSRLWRYMDLDDVFERNTERNKVEAIVLHQEENVSMWDAEGLSKMKNLKLLILYDNRFGGTLNFLSKRLHYLFWHGYPFASLPSTFNPFCLVELNMPDSAIERLWEGPKNMPLLKRVDLSNSKCLIETPNFEGSLNIKRLDLTGCTKLSRLHQSIGLLGNLTFLSLRNCTNLTSLDFGDDRVSNLGSLRVLHLSGCTKLESTPNFKVASKLEYLNMDGCTSLSTVHVSIGALTRLRFLSLRECTKLKCVPSEINTMVFLTTLDLFGCSDLMTFNLKQERDAELTNKAQILPPRSKTRNSSSHMKALIFLDLSFCNLMKFPDAIGELMCLERLNLQGNKFCSIPNTISKLSCLAYLNLAHCRLLEYLPVLPTKSASSVGRYFLTASGSRDHRSGFYVFDCLTVFHSTFKRYQLPWLRRLLKEPRHFRCGFDIISRCVDTKFGKIPPWFNHRFGGDSIIRIGHCNEDDDWIGFAFCVAFQKNNRSTSSSHHSTSFPLPHPFYLSFESECTEERFDMPLNLELAKINGSEHLWIIFISRKHCHFVKTEALITFKACPGLVVKEWGLRRVVKKDIEKNEDVEENEMRQEIHEGRCSSSSLPVLIIGNVKKDSSFGPKIQLPYNWLVTEEDEIENFEAKAKENTLSIMGLEIGQSQ* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1841 1151 Pfam TIR domain 6 173 IPR000157 GO:0007165
Apr2g1841 1151 SUPERFAMILY L domain-like 798 867 - -
Apr2g1841 1151 ProSiteProfiles TIR domain profile. 4 170 IPR000157 GO:0007165
Apr2g1841 1151 Gene3D - 178 334 IPR027417 -
Apr2g1841 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 433 IPR027417 -
Apr2g1841 1151 Gene3D - 340 423 IPR042197 -
Apr2g1841 1151 SUPERFAMILY L domain-like 534 772 - -
Apr2g1841 1151 PRINTS Disease resistance protein signature 206 221 - -
Apr2g1841 1151 PRINTS Disease resistance protein signature 282 296 - -
Apr2g1841 1151 PRINTS Disease resistance protein signature 374 388 - -
Apr2g1841 1151 PRINTS Disease resistance protein signature 683 699 - -
Apr2g1841 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 683 1085 IPR044974 GO:0006952
Apr2g1841 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 700 IPR044974 GO:0006952
Apr2g1841 1151 Gene3D Ribonuclease Inhibitor 502 680 IPR032675 -
Apr2g1841 1151 SMART till_3 5 145 IPR000157 GO:0007165
Apr2g1841 1151 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 700 - -
Apr2g1841 1151 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 683 1085 - -
Apr2g1841 1151 SUPERFAMILY "Winged helix" DNA-binding domain 409 511 IPR036390 -
Apr2g1841 1151 Pfam Leucine Rich Repeat 590 607 IPR011713 -
Apr2g1841 1151 Gene3D - 2 176 IPR035897 -
Apr2g1841 1151 Coils Coil 1068 1088 - -
Apr2g1841 1151 Pfam NB-ARC domain 190 407 IPR002182 GO:0043531
Apr2g1841 1151 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 148 IPR035897 -
Apr2g1841 1151 Gene3D Ribonuclease Inhibitor 681 786 IPR032675 -
Apr2g1841 1151 Gene3D Ribonuclease Inhibitor 787 963 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1841 Apr-Chr2 24000134 24005645 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1841 3 832 WRKY Transcription Factor Family AT4G12020 29.074 4.63e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1841 - - aprc:113855874 2332.75