Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1832 ATGCAACGAGCAAGTGACCTTCTTTTTGGATTCTCAATATATGCTGAGCCAACTAAGGGTAAAATAATTGAGAAAGCATTTTCAGCTATGGATGAGTTGTCAAAGCTAGGTGTTGCAGGGCAACCTTTGTGGCAGCCCCAAACAAACGATAGATTTGACACTTTAAATCATATTGAATATTTGAGGCAATTTGGTCAGGCTGATACAACACTAAGAGAGATTGTTAAGCTGATTGAGATTGGAGAGCCTCAAATTGAATTGCCAAGCTTTGACTTGTATCAAACTGACCATCCAACATCCAAGGCAACTCCGAGAGCAGCTCTACAAATTGAAGCTTCACGAGATATGGCCACTATTAACATGAGTCCAACCAACATTGTTGAATTACTTATGGATATGAATCAATGGTGGAGTGCTTTTTACAATATTGTCTCAAAAGCAAAAATCCTGGGAACCATGTTTGATGGAATGGAAGGAGGCTATGACGGAAAATTGCACGTGATGAGCGCTGAACTTCATTTGCCTACTGCTGTTATACCGACGAGGGAGTGTTATTTTGGAAGGTACTGCAAGCAATTGTCTCATGACAAGTGGGGGATCGTTGATGTTTCATTGGAGAAGTTTTTTCCTTCTCCAACAAGTAATTTTCTGAAGAGACCATCTGGTTGTTTGATTACAGCAATGCCTAATGGATGCTCTGAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAATTGGATGATCGTTTTAAGCAGCTAGTCACTTCTGGTTTGGCTTTTGGTGCAACGCGTTGGCTTGCTTCTTTAGTTCGGTACAGTGAATGGCGTCAAGTTCTGAATGCATCAGCATTTATAGCAGATGATGGAGTTCATATACCTCAAACTGGGAGGACAAGTTTCTTGAAACTGGCGGATAGAATGATGAGAAGCTTTTGTGCTAATATCAGTGCTAGCCCAAGCAATCCATGGATGCAAATAGCTACTTTTCCAGGTTCCACAGACGTGAGAGTCATGATTATGAATGATGCGGCAGATCCTGAGAAGTCTCTTGGTACAACGGTGGTTTTCACTACTACTCTTTGGCTGCAAGTCTCCCCTGATCGATTATTCAACTACCTTCGTCACGTGAATTCCAGATCCAAGTGGGATGTGCTTTCACGTAGACTTTGTATTCGAGAATTCGCGGCAATTATTAAGGGCGAAAATTCCAGAAATCGTGTTTCCTTGATGAGTGCAAATACTACAAAGGGCAAGATTGAAATTTTTTATCTGCAAGAGAGTTGCACAAACTCAACAGGTTCCTACGTGATTTATGCTCCACTAGATGAGTTAACTCTATCCGCTCTTGCAAGTGGATGCGACCCTGGGAAAGTGGTTATCTTGCCATCAGGGTTTTCTATCCTTCCTGGAGGGCTAGAAGGAGGCACTGGAAGTTTCCTAACTATTGCATTCAACATAGTTGAAAATGCCATTAATAGGGCTTTTATCCCTCCTGAATCAATTGAAACCATCTATAAAGTTATTACAGATACTGTTACCTCCATAAAAGATGGGGTGCGGTACCATAATCTACACAACAATTGGATGGATGATTGA 1602 0.4164 MQRASDLLFGFSIYAEPTKGKIIEKAFSAMDELSKLGVAGQPLWQPQTNDRFDTLNHIEYLRQFGQADTTLREIVKLIEIGEPQIELPSFDLYQTDHPTSKATPRAALQIEASRDMATINMSPTNIVELLMDMNQWWSAFYNIVSKAKILGTMFDGMEGGYDGKLHVMSAELHLPTAVIPTRECYFGRYCKQLSHDKWGIVDVSLEKFFPSPTSNFLKRPSGCLITAMPNGCSEVIWVEHVEADHSQLDDRFKQLVTSGLAFGATRWLASLVRYSEWRQVLNASAFIADDGVHIPQTGRTSFLKLADRMMRSFCANISASPSNPWMQIATFPGSTDVRVMIMNDAADPEKSLGTTVVFTTTLWLQVSPDRLFNYLRHVNSRSKWDVLSRRLCIREFAAIIKGENSRNRVSLMSANTTKGKIEIFYLQESCTNSTGSYVIYAPLDELTLSALASGCDPGKVVILPSGFSILPGGLEGGTGSFLTIAFNIVENAINRAFIPPESIETIYKVITDTVTSIKDGVRYHNLHNNWMDD* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1832 533 SUPERFAMILY Bet v1-like 110 277 - -
Apr2g1832 533 SMART START_1 65 278 IPR002913 GO:0008289
Apr2g1832 533 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 2 524 - -
Apr2g1832 533 Pfam START domain 106 274 IPR002913 GO:0008289
Apr2g1832 533 CDD START_ArGLABRA2_like 19 276 - -
Apr2g1832 533 ProSiteProfiles START domain profile. 15 280 IPR002913 GO:0008289
Apr2g1832 533 SUPERFAMILY Bet v1-like 298 487 - -
Apr2g1832 533 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 524 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1832 Apr-Chr2 23930748 23935759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1832 1 521 Homeobox Transcription Factor Family AT4G04890 39.372 1.92e-119 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1832 K09338 - jre:108992281 492.271