LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr2g1827	ATGAAAAATACCTTATCGCACAGAATAGTAGCAATAATAGCGAATCTGTTGTTGTTGTTGGTTTGTGATGGACAAGGTTTGGAGGGCGGAAAACTGGCATCGGCGCCGCCGTCAATGACGGAGCTAGACAATTGCGACGGCCTGTTCCTGACGTACAGCTTATTGGGAAGGGAGAAGGAATTTCCGCACGTGAAAAATGTGTCGAAACAGGCGTGGGCGTTCAAGGCGGAAGCGTCGTTGATGAACGTGGGGGATGAGGAGGTGACGGGTTGGAAGATGTTCGTTGGGTTTCAGCATAAGGAGATTCTCGTCTCCGCCGACGGTGCCGTTCTCATTGACGCTGGCGACTTTCCGGCCGAGGTTGGGAACGGAACCACCCTTGTGGGAAACGACGTTACGGATTTGAAAACGGCGATTGATACCGCCGGTGATGTTAACCAGATGGGTGTGAGGATTCAGATGACTGGAACGCAGTTTGGTTTGGGAGTTGGCGCCACCCCTATGCCTAAGACTATACGTCTCGAGAATGATGGATTCAAATGCCCCGCACCTGGTCGTAAAGGGTCGAGAATGTTTGTATGCTGCAGAAAGGACCCCAAAATGAAGGCAAAACTACAGAAGAAAACAAAGTACCCTCCTCGTCGCTATGGAGATCTAACCATAGCATACGATGTGCTTCAAGCCTTCCAGAACAACTACTACGCCCAAGTAACAATTGACAACAACCACCCATTGGGTCGTCTTGATCACTGGAACTTGACATGGGAATGGCAAAAGGGTGAGTTCATTTACTCCATAAAAGGAGCATATGCTCGCAAAAGGGACCCTTCTGAGTGCTTATATGGTCTTGCTGGAAAGTACTACAAGGACTTAGATTTCTCACAAGTCACAAGCTGTCAGAAAAAACCAATCCTCTTTGACCTTCCTGCTGAAAAAGCAAAAGATGAGAAGCTTGGTAAAATCCCATGGTGCTGCAGGAATGGCACTGTTTTGCCTCCAATCATGGACAAGAACCAAGCAAGGTCAATTTTTCAGTTGCAAGTGTTCAAGATGCCACCTGATACAGACAACAGAACCGCTCTCACTCCCCCTTCAAAGTGGAACATTGATGGTGTCATCAATCCACAGTACAAATGTAGTGCTCCAGTTAGAGTTGACGCACAAGAATTCCCTGACCCAAGTGGGCTTAGATCAATTACCACAGCTGTGGCTAGTTGGCAAATAGTTTGCAATATCACCAAACCTAAACCTCAAGAAACCCGTTGTTGTGTCTCATTCTCAGCATTCTACAATGAATCTGCTATCCCTTGTAACACTTGTGCTTGTGGTTGTGATGATACAAGGAAGTGCAACTCCAAAGCCTCTCCTTTGCTTCTTCCACCCGATGCTCTTCTTGTCCCTTTTGTTAACAGAACCTTGAAAGCACGTGCATGGGCCAAACTCAGGCACACGCATTTGCCTAGTAAGTTACCCTGTGGAGATAACTGTCCCATTAGCATAAACTGGCACGTGAGTTCAGATCACAAGGATGGATGGACGGCTAGGATCACGCTTTTCAATTGGGAAAGCTATTCCTTTGATGATTGGTTCACGGCTATTCAGTTGAACAGAACTTTCGAAGATTTTGAAGATGTGTACTCCTTCAATGGGACAAGAATTCCGGGTCTCAAAACCGTCTTCTTGCATGGACTAAAGGGTTTGAATTATTTGGCTGGAGAAACCAATGGAACCCATGCTTACGACCCAAAGGTGCCAGGAAAGCAACAAACTGTGATTTCTTTCACTAAGAAGCACGAGAAACACTTTGATATTATGCATGATGGGTACCCCACTAAGGTGTTCTTCAATGGAGAAGAATGTGCACTACCTCCAATTAGACCTGCCAAAAGTTCAGGGCATCACTCTTCCACCAGTGTCATTGCTAGAATTTGGCTCTTGGTTTTGGTAAAGATCCGCTTTAAAAGGTATTTGCTTTTTCCTTCAGGGCTGCTCTCATATATCACTCTCATCAACGACGGGGTGCTTAGACAAACTTGA	2037	0.462	MKNTLSHRIVAIIANLLLLLVCDGQGLEGGKLASAPPSMTELDNCDGLFLTYSLLGREKEFPHVKNVSKQAWAFKAEASLMNVGDEEVTGWKMFVGFQHKEILVSADGAVLIDAGDFPAEVGNGTTLVGNDVTDLKTAIDTAGDVNQMGVRIQMTGTQFGLGVGATPMPKTIRLENDGFKCPAPGRKGSRMFVCCRKDPKMKAKLQKKTKYPPRRYGDLTIAYDVLQAFQNNYYAQVTIDNNHPLGRLDHWNLTWEWQKGEFIYSIKGAYARKRDPSECLYGLAGKYYKDLDFSQVTSCQKKPILFDLPAEKAKDEKLGKIPWCCRNGTVLPPIMDKNQARSIFQLQVFKMPPDTDNRTALTPPSKWNIDGVINPQYKCSAPVRVDAQEFPDPSGLRSITTAVASWQIVCNITKPKPQETRCCVSFSAFYNESAIPCNTCACGCDDTRKCNSKASPLLLPPDALLVPFVNRTLKARAWAKLRHTHLPSKLPCGDNCPISINWHVSSDHKDGWTARITLFNWESYSFDDWFTAIQLNRTFEDFEDVYSFNGTRIPGLKTVFLHGLKGLNYLAGETNGTHAYDPKVPGKQQTVISFTKKHEKHFDIMHDGYPTKVFFNGEECALPPIRPAKSSGHHSSTSVIARIWLLVLVKIRFKRYLLFPSGLLSYITLINDGVLRQT*	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr2g1827	678	PANTHER	COBRA-LIKE PROTEIN 10	10	650	-	-
	Apr2g1827	678	Pfam	COBRA-like protein	233	413	IPR006918	GO:0010215\|GO:0031225
	Apr2g1827	678	PANTHER	COBRA-LIKE PROTEIN 7	10	650	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr2g1827	Apr-Chr2	23881234	23885970	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr2g1827	33	639	COBRA Gene Family	AT3G20580	62.092	0.0	790

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr2g1827	-		-	gmx:100789175	1123.61