Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1805 ATGAGGATTTCAACACATGCAATAGTTGTGTTCCTTTTGTGGTTTTCTTCTACGCTACTAGTCCTTGGGCAGGGTAACTTAGATAGTGAGACAACATTGAGAGTGCTTTTGGAAGTGAAGAAGTCTTTTGCGGAAGACCCACAAAATGTTCTAAGTGATTGGTCAGAGGACAATACAAACTACTGCACTTGGAGAGGGGTGTCATGTGGATTTAACTCAATTTCAAACTCTTTAGATGATGACTCGGTGCAAGTGGTGGGTCTCAACCTTTCTGACTCGTCACTCACTGGGTTAGTATCCCCTTCACTCGGTCGTTTGCAAAACCTACTCCATCTTGATCTCTCTTCCAACAGCCTCACGGGTCCCATTCCACCTAATCTCTCCAACCTCACTTCCTTGGAATCTATGCTTCTCTTCTCTAACCAACTTACGGGTCAAATTCCCATTGAGTTTAGCTCGCTCACGAGTCTCCGAGTCATGCGACTCGGTGACAATGCATTAACGGGTACGATTCCCGCGTCTCTTGGGAATCTGTTCAACCTGGTCAACCTTGGTTTGGCTTCCAGTGGGCTCACCGGGTCGATTCCACCTCAACTCGGTCAACTCAGTCTCTTGGAGAATCTGATCCTGCAGGACAACGAGTTAATGGGCCCGATTCCTACCGAGTTGGGGAACTGCTCAAGCCTCACCATTTTCACTGCAGCTAACAACAAACTCAATGGGTCAATTCCGAGTGAACTGGGTCAACTCAAGAATCTGCAAATCCTCAACCTTGGCAACAACAGCATTTCACGGGAGATTCCGAGTCAACTCGGAAACATGAGTGAACTCGTTTACTTGAACTTCATGGGAAACCAGCTCGAGGGTGCTATTCCACCGGCACTAGCTCAACTGGGAAATCTTCAAAATCTGGACTTGTCAATGAACAAGCTCGGTGGAGGAATTCCGGTGGAGTTAGGCAACATGGGTCAGTTAGCTTACATGGTTCTGTCTGGTAACAACCTTAACTGTGTCATACCAAGAGCCATTTGTTCCAATGCAACAAGTTTGGAACACTTGATGCTGTCAGAAAGTGGACTTCATGGTGAGATTCCATTTGAGCTGAGTCAGTGCCAGCAACTGAAGCAACTTGATTTGTCCAACAACTCACTCAATGGGTCCATTCCTCTTGAACTTTATGGGTTGCTTGGGTTAACTGATCTCTTGCTGAACAACAACAGCTTGGTTGGTTCCATCTCTCCCTTCATAGGAAACCTCAGTAGCTTGCAAACTCTCGCTTTATTTCACAACAATTTGCAGGGTTCTCTGCCTAGAGAGATTGGAAGGCTTGGGAAATTGGAAATTTTGTATCTTTATGATAATAAGTTGTCTGGGGCTATACCTAAGGAGATTGGCAATTGTTCTAGCTTGCAAATGGTTGATTTCTTTGGAAACAATTTCAGTGGGGAAATTCCCATCACTATTGGAAGGCTGAAAGAGTTGAATTTCCTTCACCTTAGGCAGAACGAGCTTGTGGGTGAGATTCCAGCCACCTTGGGCAACTGTTATAAATTGAACATTCTGGATTTGGCTGACAATCAGCTCTCAGGTGCAATTCCTGCAACGTTTGGATTCCTCAAGGCATTGCAACAGGTCATGCTCTACAACAATTCTCTTGAAGGTAACCTCCCTCACCAACTGATAAATGTAGCAAAATTGACCAGAGTGAATCTTTCAAAGAATAGATTGAATGGTAGTATGGCTGCATTGTGTAGCTCTCGGTCCTTTCTTTCTTTTGATGTTACCAACAATGAGTTTGAGGGTGAAATTCCTTCCCAACTAGGAAGCTCACCATCCCTTGAGAGGCTGAGATTAGGTAACAATAAATTTTCGGGTGAAATTCCTAGGACATTGGGAAAAATCAGTGAGCTTTCATTGTTAGACCTCTCAGGAAATTCACTCACTGGACCAATACCAGCTGAGCTTTCTTTGTGCAACAAACTGGCTTATATTGATTTAAACAGTAATCTTCTGTTTGGACAAATACCATCATGGCTTGGAAGTTTGCCCCAGTTAGGGGAGCTTAAGCTTTCCTCCAATAACTTTTCTGGACCTCTTCCATTAGGCCTATTCAAATGTTCTAAATTGCTGGTTCTCTCTCTAAATGACAACTCTCTGAATGGAAGTCTTCCAGCTGATATTGGTGATCTTGCATACCTTAACGTCCTCAGGCTTGACCATAATAACTTATCTGGACCAATCCCTCCGGAGATAGGTAAGTTGAGCAAGCTTTATGAGCTCCAGCTCTCTAGAAATAAGTTCAATGGTGAGATGCCAACTGAGATTGGAAAACTTCAAAATCTTCAAATCATTTTAGACCTCAGTTACAATAATCTCTCAGGTCACATCCCAACTTCTCTTGGGACGCTGTCAAAGTTAGAAGCACTTGATCTTTCCCACAATCAACTCACTGGAGAAGCCCCTCCACAAGTTGGTGAAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACCTTCAAGGAAAATTGGACAAGCAATTCTCCCACTGGCCAATTGAGGCCTTTGTAGGAAACCTACATCTTTGTGGAAGCCCTCTTGAGCGCTGCCATGGCGATGATGCATCAGGCAGTGAACCGTCAAGCCTAAGTGATTCATCAATAGTGATTATCTCTTCTATTTCAACTCTAGCTGCAGTTTCACTTTTGATACTTGCTGCAAGAATCGTCTTCAAAAACAAGCAAGAATTTTGCAGGAAAGGCAGTGAAGTGAACTATGTCTACTCTTCCTCTTCATCGCAAGCACAGAGAAGACCACTGTTCCAACTAAATGATCCTGGAAAGAGAGATTTCAGGTGGGAAGATATCATGGATGCCACGAACAATCTCAGTGATGATTTCATGATTGGATCAGGAGGTTCAGGGAAGATCTACAAAGCAGACTTGGCCACCGGAGAAACAGTGGCTGTCAAGAAGATTTCATCCAAAGATGAGTTTATGTTAAACAAAAGCTTCATAAGAGAAGTTAAGACACTAGGGAGGATTAGGCATAGACATCTGGTGAAGCTGATAGGATATTGTAGCAATAAAGACAAAGAAGCAAGTTGGAATCTGTTGATATACGAGTACATGGAGAATGGAAGTGTATGGGATTGGCTTCATGGGAAACCAGCCAAGGCAAGCAAAGTAAAGAGGAGCCTTGACTGGGATACAAGATTCAAAATTGCTGTGGGATTAGCTCAAGGAGTGGAGTACCTCCATCATGATTGTGTGCCAAAGATCATTCATAGGGACATCAAATCCAGTAACGTATTGCTAGATTCCAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAAGCAATCATTGAGAATTATGACTCCAATACTGAGTCTAATTCTTGGTTTGCTGGGTCTTATGGCTACATAGCTCCAGAGTATGCATACTCCCTACAGGCAACAGAAAAAAGTGATGTTTACAGCATGGGAATCGTGCTAATGGAGCTTGTTAGTGGTAAAATGCCAACAAATGAATTTTTTGGTGCTGATATGGACATGGTGAGATGGGTGGAGATGCATATTGATATGCATGGCTCTGCCAGTGAGGAATTAATAGATCCTGAGCTGAAACCTCTTTTGCCTGCCCAAGAGTTTGCTGCATTTCAAGTGCTTGAGATAGCCTTACAGTGCACCAAAACTACACCACAGGAGAGGCCGTCTTCAAGGAAAGCATGCGATCTTCTCCTCCATGTATTCAACAACAGGGTGGTGGACTTTGAGAAGATGAATTTGGATCATTACAAGTGA 3810 0.4352 MRISTHAIVVFLLWFSSTLLVLGQGNLDSETTLRVLLEVKKSFAEDPQNVLSDWSEDNTNYCTWRGVSCGFNSISNSLDDDSVQVVGLNLSDSSLTGLVSPSLGRLQNLLHLDLSSNSLTGPIPPNLSNLTSLESMLLFSNQLTGQIPIEFSSLTSLRVMRLGDNALTGTIPASLGNLFNLVNLGLASSGLTGSIPPQLGQLSLLENLILQDNELMGPIPTELGNCSSLTIFTAANNKLNGSIPSELGQLKNLQILNLGNNSISREIPSQLGNMSELVYLNFMGNQLEGAIPPALAQLGNLQNLDLSMNKLGGGIPVELGNMGQLAYMVLSGNNLNCVIPRAICSNATSLEHLMLSESGLHGEIPFELSQCQQLKQLDLSNNSLNGSIPLELYGLLGLTDLLLNNNSLVGSISPFIGNLSSLQTLALFHNNLQGSLPREIGRLGKLEILYLYDNKLSGAIPKEIGNCSSLQMVDFFGNNFSGEIPITIGRLKELNFLHLRQNELVGEIPATLGNCYKLNILDLADNQLSGAIPATFGFLKALQQVMLYNNSLEGNLPHQLINVAKLTRVNLSKNRLNGSMAALCSSRSFLSFDVTNNEFEGEIPSQLGSSPSLERLRLGNNKFSGEIPRTLGKISELSLLDLSGNSLTGPIPAELSLCNKLAYIDLNSNLLFGQIPSWLGSLPQLGELKLSSNNFSGPLPLGLFKCSKLLVLSLNDNSLNGSLPADIGDLAYLNVLRLDHNNLSGPIPPEIGKLSKLYELQLSRNKFNGEMPTEIGKLQNLQIILDLSYNNLSGHIPTSLGTLSKLEALDLSHNQLTGEAPPQVGEMSSLGKLDLSYNNLQGKLDKQFSHWPIEAFVGNLHLCGSPLERCHGDDASGSEPSSLSDSSIVIISSISTLAAVSLLILAARIVFKNKQEFCRKGSEVNYVYSSSSSQAQRRPLFQLNDPGKRDFRWEDIMDATNNLSDDFMIGSGGSGKIYKADLATGETVAVKKISSKDEFMLNKSFIREVKTLGRIRHRHLVKLIGYCSNKDKEASWNLLIYEYMENGSVWDWLHGKPAKASKVKRSLDWDTRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNVLLDSKMEAHLGDFGLAKAIIENYDSNTESNSWFAGSYGYIAPEYAYSLQATEKSDVYSMGIVLMELVSGKMPTNEFFGADMDMVRWVEMHIDMHGSASEELIDPELKPLLPAQEFAAFQVLEIALQCTKTTPQERPSSRKACDLLLHVFNNRVVDFEKMNLDHYK* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1805 1269 SMART serkin_6 963 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1805 1269 SUPERFAMILY L domain-like 33 340 - -
Apr2g1805 1269 Pfam Protein kinase domain 968 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1805 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1094 1106 IPR008271 GO:0004672|GO:0006468
Apr2g1805 1269 Gene3D Ribonuclease Inhibitor 582 878 IPR032675 -
Apr2g1805 1269 Pfam Leucine rich repeat 756 816 IPR001611 GO:0005515
Apr2g1805 1269 ProSitePatterns Protein kinases ATP-binding region signature. 969 992 IPR017441 GO:0005524
Apr2g1805 1269 Gene3D Ribonuclease Inhibitor 185 289 IPR032675 -
Apr2g1805 1269 SMART LRR_sd22_2 371 392 - -
Apr2g1805 1269 SMART LRR_sd22_2 250 276 - -
Apr2g1805 1269 SMART LRR_sd22_2 803 829 - -
Apr2g1805 1269 SMART LRR_sd22_2 298 319 - -
Apr2g1805 1269 SMART LRR_sd22_2 443 469 - -
Apr2g1805 1269 SMART LRR_sd22_2 106 132 - -
Apr2g1805 1269 PRINTS Leucine-rich repeat signature 374 387 - -
Apr2g1805 1269 PRINTS Leucine-rich repeat signature 803 816 - -
Apr2g1805 1269 Gene3D Ribonuclease Inhibitor 487 581 IPR032675 -
Apr2g1805 1269 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 9 1265 - -
Apr2g1805 1269 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Apr2g1805 1269 SUPERFAMILY Protein kinase-like (PK-like) 946 1249 IPR011009 -
Apr2g1805 1269 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Apr2g1805 1269 SUPERFAMILY L domain-like 341 669 - -
Apr2g1805 1269 Gene3D Phosphorylase Kinase; domain 1 923 1043 - -
Apr2g1805 1269 Gene3D Transferase(Phosphotransferase) domain 1 1044 1265 - -
Apr2g1805 1269 ProSiteProfiles Protein kinase domain profile. 963 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1805 1269 SMART LRR_typ_2 106 130 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 682 706 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 443 467 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 419 442 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 539 563 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 730 754 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 298 322 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 778 803 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 634 658 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 202 226 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 491 515 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 154 178 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 250 274 IPR003591 -
Apr2g1805 1269 SMART LRR_typ_2 827 858 IPR003591 -
Apr2g1805 1269 SUPERFAMILY L domain-like 587 849 - -
Apr2g1805 1269 Gene3D Ribonuclease Inhibitor 290 390 IPR032675 -
Apr2g1805 1269 Gene3D Ribonuclease Inhibitor 391 486 IPR032675 -
Apr2g1805 1269 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 9 1265 - -
Apr2g1805 1269 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1805 Apr-Chr2 23675611 23679508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1805 35 707 Receptor kinase-like Gene Family AT1G17750 36.912 6.22e-98 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr2g1805 Pkinase 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1805 - - gmx:100801889 2145.93