Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1803 ATGATATCACCCCAGGTTGAAGTCACCCCATCTTCACCATTTGGTTGTGTTAATCGTCGTGATGCATGCTCCACAACACATGCTGCATTTCAGAAAAACATGGTCGAAGACAACATTAACATATCTGATTCTGCACCAAAGAATGACTCTAAAAACCCAACCAACAAAATTGATACTTGGCCTTGGGTCTCAAGAGTTGCTAAGAACGATAACCTTCGAAACCTGAGTTTCACAGATAGGCTTCACAATATCAAAAAAGATGAATCATCATTGTCTGCATTGGTGAGCCCAAGGCACTCAAAAGTCATTGATCGATGGGCTGCGACTGCCAGACAACATGCACAAAAAATGGCAACAACACTTGAGAATAACAAGGTGGAGGTAAAGGACAAATTTCCTTCAAGGTCATCAAGTTTTAATTCTAGAAAAGAAGTGTCCCCTACACGTTCTAATGGCTCCTTTGAAAGTGAAATCTCAAACCTTGGTGCTTCTTTCCTTGTTCGGATATGGGAGAAGAGGCTTAAAACCCAATCCAACAATTGCACCAAACCAAATGCTTCAGATTCCCCTAGAAGGACTAGTTCTGATGCAAGCAGTAATGAGAATGCAGTTTCTGTGGAGGAACAGTGCATGGTCTTAGAAGAAGGTGATAGAACCCTTAATGAGGAATCGTTCCCAGATTGGGAGGAATATAATAAAACAAGACTAAGTGATCAATCATGTTCTTCACCAAAAATTAGTACTTTAGATGTTGCTGAAAACGAGAGGGGTAGAGTTGCGTATATTATCAAGAGACTTACGGATACAAATCAAATGCGAAGTTCAGAAGTGTTGTTGAATGATGACAATGATCATGAGCTTTGTAGTAGTGTGACAGGATCTCCATATAGAGAGCGTGGATCTCCATACAGAGAGCGCGATCCTTTTTCTAAACCAAAGCAACAAGAGCATAGAGCTTTTGCTCATGTCATAAGTTCCCCGCGTATTAGGGGACGCCAAGCATTCAATGATTTGCTTATGCAGTTTGAGAGTAACCGGCATGGAGAGCTCAACAATCTTGCAAGGCGGGGTGCAGTTTCCAAGTTCACACAAAGAGGTCGAATTCAGTCATTGCTTCGACTTAGATTATTACAACGTGGAATAGCTGTTTTTGATCTATCTGGCCAGAAACCGGCAGCATCTGAAGTGAACAGACAACAAGGATCTTCAGCAATTATGCAACTTAGGGAAAGATTTAACACAGGAAATGAGCCAAGAACTCCATCTCTGGTTGAAAAATCCAATCCAAGAAGTCCTAATAGAGAGATAGTAAGCACTGGCATGCGCTATGAAAAACCTACACGAAACTTCGTGTCTAAAACTAGTGTAAATAGTAAAGCTCATCCAAGTTCAGATGTCACATTTCGAGGAACATTCTTTGGAGTTAAAAATTATGATCCTAAAGAAACTATTAGGACATCTTCATCCATGGTTGATTCAAATGCAAATTATGAGATGGTCCATAAGGCAGTGACAAATGACCGACAGGGTGATACCACTGAAATCAATTACGATGAGATGGCAATAGAGGAAGAGGTGAGTGACCAGCAATATGCTGCAAGTAGTTATGATTACACAGTAGAAGAGGAAGAGGTAAGTAACCAGCATTATGACGAAACTAGTTATGACTGGACCAGTCATATTTCTCGGCCTAGAAGCTATTGGGAAGAACGAAGGCAAGAATGGTATAGGGAAAAGCTTGACTTTAGTTCAGCAAATGATGAGATACGTAAGCTCCTTGAAAGAAAAACAGTGTCAACTTTGCTTTCTAGTGGCTTCCACGAAAGGTTGGAAAGATTGATGAAGTCTCATATGGGAACAAAGTCACACCTAATTAGTAGTCAATGTGATGAGGAAGATCAAGAAGGGAGTATGGACCAGTTGATGGCATTTTTTCAAGAACACTTGCATTTTAGAAGCAAAAGTCAAGAAGATGGAATGGATAGAGTCCAAGAGGAAGAGGAGAGGAGAAATGAGGAAGAAGAAGCAGAAGAGAAGAGCATCATTAGTGGTTCAGATCATGAAGGTGATTATTTTAATCATTCCTCTTCATCACTGCATGCACCTTCCCCATCATCATGGAGTTACAGAGACAATGATGCTGGAGATGATTCTGATAGACTTGTGTCTATGTCCTCACCACCAACTTCTCATCAATCTCAATCATTCTATCAAGATAATCGACAATACTCTTCATCCATAAATCACCATTCAATTGAAATGGAATTCATATATGAATTGCGAGGACAGATGGATCAACTTTTTCATGAGATGTCTGAGCTAAGGAAATCAATAAAATGTTGCATGGACATGCAGATGCAAATGCAATTACAACAATCTAAGAACCAAGAGGTTCACACAGAAGAAGAAAAGAAGTTCCATAACAGAACACCAAAGAAAGGCAACTGTTGCATTTGCAATGAGAAGAAAGTAAACTCACTTTTATATAGATGTGGTCACATGTGTGCATGTTTCAAGTGTGCCAATGAGTTGCAATGGAACAGTGGAAAATGTCCAAAATGTCAATCTCCAATCATAGATGTTGTTCGAGTATATGCTGACACAGAATCTTCCATGGTGGGCATGGTTTAG 2631 0.4002 MISPQVEVTPSSPFGCVNRRDACSTTHAAFQKNMVEDNINISDSAPKNDSKNPTNKIDTWPWVSRVAKNDNLRNLSFTDRLHNIKKDESSLSALVSPRHSKVIDRWAATARQHAQKMATTLENNKVEVKDKFPSRSSSFNSRKEVSPTRSNGSFESEISNLGASFLVRIWEKRLKTQSNNCTKPNASDSPRRTSSDASSNENAVSVEEQCMVLEEGDRTLNEESFPDWEEYNKTRLSDQSCSSPKISTLDVAENERGRVAYIIKRLTDTNQMRSSEVLLNDDNDHELCSSVTGSPYRERGSPYRERDPFSKPKQQEHRAFAHVISSPRIRGRQAFNDLLMQFESNRHGELNNLARRGAVSKFTQRGRIQSLLRLRLLQRGIAVFDLSGQKPAASEVNRQQGSSAIMQLRERFNTGNEPRTPSLVEKSNPRSPNREIVSTGMRYEKPTRNFVSKTSVNSKAHPSSDVTFRGTFFGVKNYDPKETIRTSSSMVDSNANYEMVHKAVTNDRQGDTTEINYDEMAIEEEVSDQQYAASSYDYTVEEEEVSNQHYDETSYDWTSHISRPRSYWEERRQEWYREKLDFSSANDEIRKLLERKTVSTLLSSGFHERLERLMKSHMGTKSHLISSQCDEEDQEGSMDQLMAFFQEHLHFRSKSQEDGMDRVQEEEERRNEEEEAEEKSIISGSDHEGDYFNHSSSSLHAPSPSSWSYRDNDAGDDSDRLVSMSSPPTSHQSQSFYQDNRQYSSSINHHSIEMEFIYELRGQMDQLFHEMSELRKSIKCCMDMQMQMQLQQSKNQEVHTEEEKKFHNRTPKKGNCCICNEKKVNSLLYRCGHMCACFKCANELQWNSGKCPKCQSPIIDVVRVYADTESSMVGMV* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1803 876 MobiDBLite consensus disorder prediction 689 711 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 289 315 - -
Apr2g1803 876 ProSiteProfiles Zinc finger RING-type profile. 816 855 IPR001841 -
Apr2g1803 876 Coils Coil 111 131 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 722 737 - -
Apr2g1803 876 PANTHER BNAC05G24000D PROTEIN 1 867 - -
Apr2g1803 876 Coils Coil 656 682 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 654 737 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 132 154 - -
Apr2g1803 876 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 793 876 IPR013083 -
Apr2g1803 876 MobiDBLite consensus disorder prediction 299 315 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 178 204 - -
Apr2g1803 876 PANTHER BNAC05G24000D PROTEIN 1 867 - -
Apr2g1803 876 Pfam Zinc finger, C3HC4 type (RING finger) 813 860 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 654 685 - -
Apr2g1803 876 CDD mRING-HC-C3HC5_NEU1 815 854 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 413 435 - -
Apr2g1803 876 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1803 Apr-Chr2 23666616 23671117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1803 816 865 C3H Transcription Factor Family AT4G22250 38.000 6.31e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1803 - - aprc:113855868 1697.56