Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1800 ATGGCCAACAGAGTTCAAATTCCTACCAACAACTCAGCACTTATTGCCATGATTGCAGATGAGGATACTGTAGTTGGATTTCTGTTGGCTGGAGTGGGAAATGTTGACTTACGTAGGAAGACAAATTATCTCATTGTGGATTCAAAAACAACTGTCAAACAAATTGAGGATGCGTTCAAAGAATTTACAACACGGGAGGATATTGCAATTGTGCTGATTAGCCAATATGTTGCAAATATGATAAGGTTTTTGGTTGATAGTTATAACAAGCCTGTTCCTGCAATACTTGAAATCCCCTCAAAAGACCATCCTTATGATCCTGCACATGATTCGGTTCTTTCGCGAGTAAAGTATCTCTTCTCTACCGAATCAGTGGCATCCGGGAGACGCTGA 393 0.4046 MANRVQIPTNNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSTESVASGRR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1800 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Apr2g1800 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Apr2g1800 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Apr2g1800 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Apr2g1800 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Apr2g1800 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Apr2g1800 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1800 Apr-Chr2 23637725 23641744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1800 1 126 Primary Pumps ATPases(2) AT4G02620 87.302 3.67e-81 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1800 K02151 - gmx:100305531 251.906