Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1776 ATGTCAACGCCATCACCGTCACCGTCACCGTCTCTCCCTCCGTCTCTGGTGTCACCATCAACGCCCTCACCGTCACCGTCACCTCCACCATCTCTGGTGTCGCCTTCAACACCACCGTTAGCAACTCCTGTACCTGCATCACTGCCTCCACTATTGCCAGTACCGGAAAGTTCATCTGCGGCATCAATTTCGCCTGAAAAATCACCGACTTCTCCGGCATATACACTCAAGGGTTCTCTTCCTCCTCCTCCTCCTCCTATTAGGTTAAGTCCTTTTTATTCTCATTCCACTTCATCACCTCCTTTTGGATTGGGTCCACCGCGGCCATCAACACAAAGTTCTGGTACTGGTGCTGCAGTGGCTGTTGCCGTGTGGACCAGTATTCTACTGCTTAGCATCATTGGCATTGCTATATGGTGCCTTAGGAGGCAAAAGAAAAGGGTTTCAGAGAAGGGTGCTTATGAATTCCCATCCCCTCTTGCCTCCTCACCTCAATCTGATTTGTCCTTTCTCAAGACGCATTCTTTAGCTCCACTTATACAAAGAGCTTCTGGCGGTAACACACCATCAAGACTAGGCAACTCAAGGTCATTGTTTTCATATGAAGAACTAATCAAGGCCACAAATAATTTTTCAGCTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTGTGTGTATAAAGGGTCCCTTTCCGATGGAAGAGAGGTAGCAGTCAAACAGCTGAAACTTGAAGGAGGTCAGGGTGATAGAGAATTCAAAGCTGAAGTGGAAATTATTAGTCACATACATCATCGTCATTTGGTTTCTTTAGTAGGATACTGCATTTCAGATAACAAGAGACTTCTTGTCTATGACTACGTCCCCAACAACACCCTTTACTTTCATCTTCATGGAGATGGTAGGCCGGTGCTAGACTGGGCAAAACGTGTAAAAATCGCTTCTGATGCAGCTAGAGGAATAGCTTATCTCCATGAAGATTGCGATCCTCGGATTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGACTACAACTTTGAAGCTCGAGTCTCAGATTTTGGACTGGCCAAATTAGCTCACGATGCAAATACACATGTAACCACACGTGTCATGGGAACTTTTGGATATGTTGCCCCTGAATATGTATCAAGTGGTAAATTGACCGAGAAGTCGGATGTATATTCTTTTGGAGTCATGCTCTTGGAGCTCATTACAGGAAGAAAGCCAGTAGATATATCCCAACCAGCTGGAGAAGAGAGTCTAGTTGAATGGGCTCGACCTTTGCTAAGTCATGCACTTGATAGTGAGGAATTTGAAAGTTTGATAGATCCAAAACTAGAAAAGAACTACGTTGAAAGTGAAATGTTTTGCATGATTGAAGTTGCTGCTGCTTGTGTGCGATATTCATCCGCAAAAAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCTTCTTCTGATCTATCAAATGGAATGAGAGTTGGGGACTCTGTACTGCAATCAACAGAGATCAGATTATTTCGTAGGATGGCATTTGGTAATCAAGATTATAATACAGACCCTTTTAGCCAAGGTTCCCTTGATTCTTTGCAACAAAATATTTTTTATTATTATTTTCACCTTCTTTTCTCCTCTCTGCTTTCAATCCTGCCTACATCTGACCCACTGCAGACTTCACATTCACACCCTCGTGCTAATGGCCACTAG 1719 0.438 MSTPSPSPSPSLPPSLVSPSTPSPSPSPPPSLVSPSTPPLATPVPASLPPLLPVPESSSAASISPEKSPTSPAYTLKGSLPPPPPPIRLSPFYSHSTSSPPFGLGPPRPSTQSSGTGAAVAVAVWTSILLLSIIGIAIWCLRRQKKRVSEKGAYEFPSPLASSPQSDLSFLKTHSLAPLIQRASGGNTPSRLGNSRSLFSYEELIKATNNFSAQNLLGEGGFGCVYKGSLSDGREVAVKQLKLEGGQGDREFKAEVEIISHIHHRHLVSLVGYCISDNKRLLVYDYVPNNTLYFHLHGDGRPVLDWAKRVKIASDAARGIAYLHEDCDPRIIHRDIKSSNILLDYNFEARVSDFGLAKLAHDANTHVTTRVMGTFGYVAPEYVSSGKLTEKSDVYSFGVMLLELITGRKPVDISQPAGEESLVEWARPLLSHALDSEEFESLIDPKLEKNYVESEMFCMIEVAAACVRYSSAKRPRMGQVVRAFDSLASSDLSNGMRVGDSVLQSTEIRLFRRMAFGNQDYNTDPFSQGSLDSLQQNIFYYYFHLLFSSLLSILPTSDPLQTSHSHPRANGH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1776 572 MobiDBLite consensus disorder prediction 1 52 - -
Apr2g1776 572 ProSiteProfiles Protein kinase domain profile. 211 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1776 572 MobiDBLite consensus disorder prediction 1 115 - -
Apr2g1776 572 SMART serkin_6 211 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1776 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Apr2g1776 572 Gene3D Transferase(Phosphotransferase) domain 1 287 501 - -
Apr2g1776 572 SUPERFAMILY Protein kinase-like (PK-like) 188 482 IPR011009 -
Apr2g1776 572 MobiDBLite consensus disorder prediction 57 75 - -
Apr2g1776 572 CDD STKc_IRAK 217 487 - -
Apr2g1776 572 Gene3D Phosphorylase Kinase; domain 1 181 286 - -
Apr2g1776 572 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 531 - -
Apr2g1776 572 Pfam Protein tyrosine and serine/threonine kinase 214 483 IPR001245 GO:0004672|GO:0006468
Apr2g1776 572 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Apr2g1776 572 MobiDBLite consensus disorder prediction 76 90 - -
Apr2g1776 572 PANTHER BNACNNG34790D PROTEIN 13 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1776 Apr-Chr2 23379224 23383505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1776 109 528 Trihelix Transcription Factor Family AT5G38560 61.048 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr2g1776 PK_Tyr_Ser-Thr 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1776 - - aprc:113855863 997.267