Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1760 ATGGCTAAATTGCTCATGGATGAAACTATTCACATGATCGTCTCCATATTCCTAACATCATCACTCTTCTTGTTAATCACTTGTCCAACATCCATTTGCCAAGAAGAAAACAAGCACGTAGAGTGTAGCAAGCCATACACTTGTGGACAAATATACAACATCTACTACCCTTTCTGGGGGGAGAACAGATCCAGTTATTGTGGAAGCAACCACCAATTCAGGCTCAAATGCGAGGCTCATCAAAACACCTCAATTCAACTTGGCTCACAAAATTTCCAAGTGCTACACATTGACCAAGTGGGTTACACCATGCAAATGGTACGAACAGGCCTTGTCTATGATCATTGTTCTTCTTTGGCCTTAACCAACACTTCCCTTAACTCAAATCTCTTCCTTTACACCTCAAGTGTTAGGAACATAACCATCTTCTACGGTTGTCCTAGCTCCATGCTTTCAAACACTACACACTCTTTTCCGTGCCAAGAGGGCGGTAACAAGAGTGTTTTCTATGGGGATCCCACAACTACAAGAGTACAAGATTGTGAAGGAGTTAGAATTGAAGTGCAAGTAACACAGGAATTAACACAAGATGGAGGAATTGAAGGGCTGAACAAAGCCTTGAGTGAAGGGTTTCAAGTGAATTATATTTCAGATGGTCAATTATGCTTGAAATGCATTTTAACTAATGGAACCTGTGGAGCTAATGATAAGTCTCAGTTTTCATGCTTTTGCCCCGATGGAACTGAAGCTTTAGATTGTTCTCTTCATCAAAGTAATCGATGGAATTGGAAAAGGAAGGTTGGTATAGGCGTGGGTGCTGCTGTGATCACTTCAATTACAGTTGGCACAGCCTTTTATATCTATTATCATAAAAAGAAGAAACATCTGGTAGTATCATCATCAGTACTATCTCGGGGAATCTCTTCTGGTCCTTTTTTAGAAGACCTTGAGAAGGGATGTAAATGCATCGGACTCCATTTCTTCACCTATGGTGAACTTGAGGAGGCCACAAACTACTTTGATCCAGCCAGAGAACTAGGAGATGGAGGATTTGGGACTGTGTATTTTGGCAAACTTAGGGATGGACGTTTGGTAGCAGTGAAAAGGATGTATGAGAACAGTTACAAAAGAGTTGAGCAATTCATGAATGAAATTGAGATCTTAACTGGCTTACACCACCAAAATCTTGTGTCACTGTATGGATGCACTTCTCGCAACAGTAGAGAACTTCTACTGGTGTATGAGTACATTCCTAATGGAACTGTGGCTGATCACCTTCATGGGCAAAAATCAAAACCTGGCACACTCCCGTGGAACATTAGAATGAACATTGCCATAGAAACTGCAAGTGCATTGGTATATCTTCATGCTTCTGACATCATCCATAGAGATGTGAAAACCAACAACATTCTCCTTGACAATCACTTCAGTGTCAAAGTAGCAGATTTTGGACTCTCACGTCTCTTCCCAACCCATGTCACCCACATTTCAACTGCTCCACAAGGGACACCAGGTTATGTGGATCCAGAATACCACGAGTACTATCAACTCACTGATAAAAGTGATGTTTTTAGCTTCGGGGTTGTGCTGATTGAATTGATATCATCCATGCCTGCTGTTGATATCTCAAGGCATAGGCATGAAATTAATTTGTTCAACATGGCTATTAAGAAGATTCAAAGTGGGGCATTGCATGAGCTGGTGGACCCTACTCTTGGGTTTGATTCAGATTTCAAGGTAAGGAAAATGGTCAATGCTGTGGCTGAGTTGGCATTTCAGTGCTTGCAAAGTTCTAAAGATGTAAGGCCTTCTATGGTTGAAGTGTTGGAAAGGTTGAAGGATATAAGAAGTGATGGGAATTATAAAAGCAAGCCTGAGGTGTTGGATATCTCAGAAGACGATGCTGCTTTGTTGAAGAATGAACCACCACCACCATCACCAGATTCAAACATTGTGAGCTTATCTATACCACCAAATGGTGGTGAATAA 1989 0.4123 MAKLLMDETIHMIVSIFLTSSLFLLITCPTSICQEENKHVECSKPYTCGQIYNIYYPFWGENRSSYCGSNHQFRLKCEAHQNTSIQLGSQNFQVLHIDQVGYTMQMVRTGLVYDHCSSLALTNTSLNSNLFLYTSSVRNITIFYGCPSSMLSNTTHSFPCQEGGNKSVFYGDPTTTRVQDCEGVRIEVQVTQELTQDGGIEGLNKALSEGFQVNYISDGQLCLKCILTNGTCGANDKSQFSCFCPDGTEALDCSLHQSNRWNWKRKVGIGVGAAVITSITVGTAFYIYYHKKKKHLVVSSSVLSRGISSGPFLEDLEKGCKCIGLHFFTYGELEEATNYFDPARELGDGGFGTVYFGKLRDGRLVAVKRMYENSYKRVEQFMNEIEILTGLHHQNLVSLYGCTSRNSRELLLVYEYIPNGTVADHLHGQKSKPGTLPWNIRMNIAIETASALVYLHASDIIHRDVKTNNILLDNHFSVKVADFGLSRLFPTHVTHISTAPQGTPGYVDPEYHEYYQLTDKSDVFSFGVVLIELISSMPAVDISRHRHEINLFNMAIKKIQSGALHELVDPTLGFDSDFKVRKMVNAVAELAFQCLQSSKDVRPSMVEVLERLKDIRSDGNYKSKPEVLDISEDDAALLKNEPPPPSPDSNIVSLSIPPNGGE* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1760 662 Gene3D Phosphorylase Kinase; domain 1 314 416 - -
Apr2g1760 662 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1760 662 Pfam Wall-associated receptor kinase galacturonan-binding 42 107 IPR025287 GO:0030247
Apr2g1760 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 651 IPR044652 -
Apr2g1760 662 Gene3D Transferase(Phosphotransferase) domain 1 417 625 - -
Apr2g1760 662 Pfam Wall-associated receptor kinase C-terminal 176 247 IPR032872 -
Apr2g1760 662 MobiDBLite consensus disorder prediction 632 662 - -
Apr2g1760 662 Pfam Protein kinase domain 343 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1760 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Apr2g1760 662 SUPERFAMILY Protein kinase-like (PK-like) 324 627 IPR011009 -
Apr2g1760 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 18 651 - -
Apr2g1760 662 SMART serkin_6 340 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1760 662 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1760 Apr-Chr2 23248432 23253255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1760 44 659 Receptor kinase-like Gene Family AT1G25390 44.795 1.49e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr2g1760 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1760 - - gmx:100794703 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1042 6 15124999 15131815 Apr2g1760 2 23248432 23253255 ECH
Apr2g1760 2 23248432 23253255 Apr2g1760 2 23248432 23253255 ECH