Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1740 ATGAGGAGGAACTGCAACTTGGAACTTCGCCTTTTTCCTCCCTCCCACTCCGATCTTCGCCCCATAATGGAGGCAGAATTGAATGAGAGCCCACAACAACTGGACCAACAACAGCAACAGCACCATCCGTTAACCATTTTCTATGATGGCAAGATTTGCGTTTCTGATGTCACCGAGCATCAGGCCAGATCCATTCTAATGCTTGCAAACAAAGAGACGGAGGAAAGGGTGAGGACACCAACTGGGTCAGAACCATCATCACCATTACTGCAATCACATCATAACTTGTACAGCCCAGGCTCTGGACTTTCCATGAAAAGATCTCTGCAGAGGTTTCTTCAGAAGAGGAAGAATCGGGTCCAAGAAACATCCCCATACCATGATCATTAG 390 0.4718 MRRNCNLELRLFPPSHSDLRPIMEAELNESPQQLDQQQQQHHPLTIFYDGKICVSDVTEHQARSILMLANKETEERVRTPTGSEPSSPLLQSHHNLYSPGSGLSMKRSLQRFLQKRKNRVQETSPYHDH* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1740 129 PANTHER - 1 127 - -
Apr2g1740 129 MobiDBLite consensus disorder prediction 80 108 - -
Apr2g1740 129 ProSiteProfiles Tify domain profile. 37 71 IPR010399 -
Apr2g1740 129 MobiDBLite consensus disorder prediction 73 108 - -
Apr2g1740 129 Pfam tify domain 39 70 IPR010399 -
Apr2g1740 129 Pfam Jas motif 106 126 IPR018467 -
Apr2g1740 129 SMART tify_2 37 71 IPR010399 -
Apr2g1740 129 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 127 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1740 Apr-Chr2 23031642 23032962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1740 1 127 Tify Gene Family AT1G30135 45.455 1.80e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr2g1740 tify 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1740 - - gmx:100305565 200.675