Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1732 ATGGAGGAGGATGAGATACAAGCACAGGCGTGTAAGTTCCCAAGAGTAGGAAATGGAAGGAATGAGGAAGAAGATGGAGAGATCAGAAGAAAAGGAAGCGATGGTGTGAGCACAAACAGGTTCCACAGTTGGCACCACTCTTCTAGAATCATAAGGGTGTCAAGAGCATCTGGGGGAAAAGATAGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACAGGAGGGTTAGGCTTTCTGTTACCACAGCCATTCAGTTCTATGATCTTCAAGATCGCTTGGGTTATGACCAACCCAGCAAAGCCGTGGAGTGGTTAATAAACTCAGCTGCAGATGCCATTGCTGAACTACCTTCTTTGAACAACACATTCCCTGATACCCCCAAGCAACCAAGTGATGAGAAAAGGGCAAGTGAACAAGGCTTTGATTCTGCTGATGCAGAACTAGATGGTGAGAACACAAACTATCAGCAGCATAACAACCAAAGCCAGAACCTTTCTTTGTCCAAATCTGCTTGTAGCAGCACCTCTGAGACAAGCAAGGGTTCTGGCTTGTCCCTCTCTAGGTCTGACATTCGTGTGAACCGTGTCAAGGCCAGAGAGAGAGCAAGGGAAAGAAGAACAGCCAAGGAGAAGGAAAAGGAGAAAGAAAAAGAGAATGAATCTCACAACATAGCTCCCCACCACCACCACCAACAACACCACAATGTGAACCCCATTTCTCAAACAGCTTCTTTCACTGAGCTTCTCACTGTTGGAATCAACAATGCAGTTCCCACAAGTCCAAGAGGGTCAGTTCATCAGAATGTTAGTGACGAGCCTAATTTATTCAACAAAGCATCCAGACAGCAATGGTGTTCATCAGCACCAATGGACTACTTCACCTCAGGGCTTCTTGGACCTTCCTCTTCAAGAACCCATCACCATCATCACAATCAACCCTCTTCCTCTTCTGGGTTCTCAGTATCACAAGTCCAATTAGGACATTCCCTTCCTGAAGCCATGTCAGTTTCACCCTTCAACGTGAGTGGTGAAAACCACTCATCAGATCCTCAGCTACAACACTTCTCATTCATCCCAGATCATCTTATGTCAGCTGTGGTAACATCTTCTGCTTCTTCTCAACCCAGCGGGAATGATTACAACCTCAACTTCACCATATCTTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGTTGCCTCACTTTCAGAGGTTTTCACCTATAGACGGATCCACTGTACCTTTCTTCATTGGAGCTGCACCTGCATCAGCTGCTCCTACCATGGAGAACCATCACCACCATCAGTTTTCTTCTGTTTTTGATGGCAGCCGCTTGCAACTTTGCTATGCTGATGCATGCCGGCATTCAGACCAGAAGGGGAAAGCCAAGAACTGA 1419 0.4665 MEEDEIQAQACKFPRVGNGRNEEEDGEIRRKGSDGVSTNRFHSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINSAADAIAELPSLNNTFPDTPKQPSDEKRASEQGFDSADAELDGENTNYQQHNNQSQNLSLSKSACSSTSETSKGSGLSLSRSDIRVNRVKARERARERRTAKEKEKEKEKENESHNIAPHHHHQQHHNVNPISQTASFTELLTVGINNAVPTSPRGSVHQNVSDEPNLFNKASRQQWCSSAPMDYFTSGLLGPSSSRTHHHHHNQPSSSSGFSVSQVQLGHSLPEAMSVSPFNVSGENHSSDPQLQHFSFIPDHLMSAVVTSSASSQPSGNDYNLNFTISSGLAGYNRGTLQSNSPSLLPHFQRFSPIDGSTVPFFIGAAPASAAPTMENHHHHQFSSVFDGSRLQLCYADACRHSDQKGKAKN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1732 472 MobiDBLite consensus disorder prediction 129 143 - -
Apr2g1732 472 MobiDBLite consensus disorder prediction 1 40 - -
Apr2g1732 472 PANTHER TRANSCRIPTION FACTOR TCP24 1 472 - -
Apr2g1732 472 MobiDBLite consensus disorder prediction 17 36 - -
Apr2g1732 472 MobiDBLite consensus disorder prediction 150 190 - -
Apr2g1732 472 ProSiteProfiles TCP domain profile. 59 117 IPR017887 -
Apr2g1732 472 MobiDBLite consensus disorder prediction 119 236 - -
Apr2g1732 472 MobiDBLite consensus disorder prediction 297 324 - -
Apr2g1732 472 Pfam TCP family transcription factor 58 213 IPR017887 -
Apr2g1732 472 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 472 IPR005333 GO:0003700
Apr2g1732 472 Coils Coil 200 222 - -
Apr2g1732 472 MobiDBLite consensus disorder prediction 193 227 - -
Apr2g1732 472 ProSiteProfiles R domain profile. 193 212 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1732 Apr-Chr2 22970279 22978527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1732 39 472 TCP Transcription Factor Family AT4G18390 42.333 1.13e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr2g1732 TCP 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1732 - - gmx:100816799 508.834