Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1712 ATGGAAGTCATGCCATACCAGTTTTCCCGTTTACCTTACCATGATTCTCTCAAACTGCTCGAGGCTGATATTCACCATGCTAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGGGGCTCTTCTCCAAATGAAATTGGTTTACAACCACTTGGCTCCTCTCTTTCTGTTGTTGCTACAGTGGATGGATTGTTCTTGTGCATGCTTTCTACATAGATATCTTGACCTCTTTCACATACTTATATACAAGGTACCCAATGATGGTAGATCGAACATTACTTCTCATGGAAGGAAAGCAACCATCCGGGACTTTTATGCTGTTATACTGCCATCTCTCCAGAAGCTTCATGGTAGTGTGGAGAAGTTGGACGTTTGTAAGAAGGGGCACTCTAGCATAGATGGTTCAAGTTATGGCAAGAAGATGATTGAAGGAGATGGAAAACTAGTCAATGTTGATTTGGAAAGGGAAGATGAATGTGGGATATGCTTGGAGCCATGCACCAAAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGTATATTTACATTACATATGCATTACACATTACTACCTTACTATTATATGTTCAAAATCAAATTGGTTTCATCATATGTAACACCCTTATGTTGTTCTGCAGGAACACACGGTCAGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCTGAGGATCTATGGGTGCTCACTTGTAATGAAGATGTTGTTGATGCAGAAACAGTTTCCAAGGAGGACTTGTTGCGTTTCAACCTTTATATCAATAGCCTACCTAAAGATCTCCCAGATGCACTTTTCTTAATGTATTATGAATACCTTATTTGA 873 0.4066 MEVMPYQFSRLPYHDSLKLLEADIHHANALAAAIPRAKGGALLQMKLVYNHLAPLFLLLLQWMDCSCACFLHRYLDLFHILIYKVPNDGRSNITSHGRKATIRDFYAVILPSLQKLHGSVEKLDVCKKGHSSIDGSSYGKKMIEGDGKLVNVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWYIYITYALHITTLLLYVQNQIGFIICNTLMLFCRNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFNLYINSLPKDLPDALFLMYYEYLI* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1712 290 ProSiteProfiles Zinc finger RING-type profile. 160 232 IPR001841 -
Apr2g1712 290 PANTHER RING FINGER PROTEIN 41, 151 6 188 - -
Apr2g1712 290 PANTHER RING FINGER PROTEIN 41, 151 221 290 - -
Apr2g1712 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 243 IPR013083 -
Apr2g1712 290 SUPERFAMILY RING/U-box 151 189 - -
Apr2g1712 290 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 188 - -
Apr2g1712 290 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 221 290 - -
Apr2g1712 290 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1712 Apr-Chr2 22742325 22744260 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1712 - - aprc:113854978 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2265 10 34844908 34855613 Apr2g1712 2 22742325 22744260 PCT