Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1708 ATGGATAATGGTTGCTTCCCTTCTCAACGCCACGATGCTTTTCCAGCTGGTCTGCGAGTTCTTGTTGTTGATGATGATCCAACGTGGTTGAGGATCCTTGAAAAGATGCTCAAGAAGTGCTTTTATGAAGTGACAACATGTTGTTTAGCAACAGAGGCTCTAAAAAAGCTTCGCGAAAGGAAAGATGCATATGACATAGTCATAAGCGATGTAAACATGCCGGACATGGATGGTTTCAAACTTCTTGAGCAAGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGGGAAACAAGTAGGGTGATGAAAGGTGTTCAACATGGGGCATGTGATTATCTGCTCAAGCCAATAAGGATGAAAGAACTACGAAATATATGGCAGCATGTGTTTAGAAAGAGGATACATGAGGCAAGAGAATTTGAAAGTCATGAGGGTTTTGAGGGCATTCAATTAATGAGAAATGGATCAGATCAGTCTGATGATGGTAACCTGTTTTCTGTTGAAGAAATGACCTCAATGAAGAAAAGGAAAGATGTAGAGAACCAACATGATGACAGAGAATTGGCAGATCATTCTACCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCAGTGGATCAAATTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTTCCATGGCTAACTAGAGAAAATGTTGCTAGTCACTTGCAGAAATACAGGCTTTACTTGAGTAGGTTGCTGAAGGAAAATGAGCAGAAATGTTCCTCAAATGAAATAAAAAATTCAGATTCACCTTCGAAAGATCCAGGAAGTTTTAGTTTTCTGAACACAGCAAACAAGCAACAAAGTGATGTTGCAATTGAGAGCTTCAAATATTCAGAAGGAACTTTACTACTTCAAATGGATGCTACAAGTCATGAAAGTGATTTCAAGGAAATTGTCTCTGAGACAACAACAGAAAAAAGGAGAGTTTTAAGTAGTGACATTCCTGACCCAAAGATACAAAAAGGTTCACAGATGGTTCTTAACCAACCTTTTGCATCTTTGGAGTCATCAGAAGCAAACCATGCAATATTTGATTGCATCATACCAACACAGTACTCTGGCAAAGAAGTTGCAAAAGCGCCACCCAAAGAAGAACAAAAGACACTAGTTCAATTGGAGGATAGCTTCAGTCAATTACCATTACACGATGCACAGCATCACATTCAGGTTGATCAATCACAATCATTTGCTTCAATTAATTCCAATCCTTCTTTAACTATAACAGAAGAAAAGGTTGCTACCAACTTAGAGACCAAACCTTTATATAGTGGTTACACAAGTGATTATGTCAGTCCTGTGAGTTCAATAGGATCTGCAGTTGATGCCTTTTCTAATCATTCCAAAGGCCTTAGGCTGAATGATCAATCTTCAGAATCTATTTTAGCTTCAAATTTGGGCCTGAAGACACAGGGATTTAATCTAGATTGCAATACTGATCTAGAGTTTTATCAAAGAAACCTACTATTAGGTGGTGAGGCAGCTTCTGCACCTTTGGAGGAGGACTTGAATTTCTTTTTGCTACAAGGTGAATGCTATAATATGAACTTTGGTGGCCGTCAGAACATAGAGATGTCAGAGTATTATGATCCAAGGCTTATCGCTGAAGTTCCTACCCCTTTTTTATGA 1707 0.3849 MDNGCFPSQRHDAFPAGLRVLVVDDDPTWLRILEKMLKKCFYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESHEGFEGIQLMRNGSDQSDDGNLFSVEEMTSMKKRKDVENQHDDRELADHSTTKKARVVWSVDLHQKFVKAVDQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLLKENEQKCSSNEIKNSDSPSKDPGSFSFLNTANKQQSDVAIESFKYSEGTLLLQMDATSHESDFKEIVSETTTEKRRVLSSDIPDPKIQKGSQMVLNQPFASLESSEANHAIFDCIIPTQYSGKEVAKAPPKEEQKTLVQLEDSFSQLPLHDAQHHIQVDQSQSFASINSNPSLTITEEKVATNLETKPLYSGYTSDYVSPVSSIGSAVDAFSNHSKGLRLNDQSSESILASNLGLKTQGFNLDCNTDLEFYQRNLLLGGEAASAPLEEDLNFFLLQGECYNMNFGGRQNIEMSEYYDPRLIAEVPTPFL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1708 568 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 200 253 IPR006447 GO:0003677
Apr2g1708 568 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 553 IPR045279 GO:0009736
Apr2g1708 568 CDD REC_typeB_ARR-like 20 134 - -
Apr2g1708 568 SUPERFAMILY Homeodomain-like 197 257 IPR009057 -
Apr2g1708 568 MobiDBLite consensus disorder prediction 266 287 - -
Apr2g1708 568 MobiDBLite consensus disorder prediction 269 287 - -
Apr2g1708 568 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 553 - -
Apr2g1708 568 SMART REC_2 18 130 IPR001789 GO:0000160
Apr2g1708 568 PIRSF RR_ARR_type-B 3 525 IPR017053 GO:0003677|GO:0003700|GO:0009736
Apr2g1708 568 Pfam Response regulator receiver domain 20 129 IPR001789 GO:0000160
Apr2g1708 568 Gene3D - 196 259 - -
Apr2g1708 568 Gene3D - 18 149 - -
Apr2g1708 568 SUPERFAMILY CheY-like 17 143 IPR011006 -
Apr2g1708 568 Pfam Myb-like DNA-binding domain 202 252 IPR001005 -
Apr2g1708 568 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1708 Apr-Chr2 22712775 22719894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1708 12 258 Response Regulator Gene Family AT2G25180 56.400 1.64e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr2g1708 Response_reg 1.3e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1708 - K14491 gmx:100778324 939.873