Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr2g1682 | ATGGAGGGTGACACATTAAACAAGAACATCCTTCAGAGTCCAGCACTTCTTGAGTACATCCTGAAAACGAGTGGCTATCCAAAAGAGCACGAGCAATTGAGGTTACTCAGAGAAACCACCGTACAAAAGTACAAGGAAGATATTTATCTGATGAATGTGCCAGTGGATGAAGCGCAGTTCATGTCGATTCTTCTTAAAATCATGAATGCGAAGAAAACACTCGAGATTGGAGTATTCACTGGTTATTCTCTTCTTGCTACAGCTCTTGCTCTGCCTGATGATGGCAAGATAACTGCAGTTGATGTAGATAGAGATGCCTACGAGGTTGGGTTGCCCTTCATTCAGAAGGCAGGAATGGAGCACAAAATTGACTTTATCCATGGTGATGCATCATCAGTCCTCAATGATCTTCTCGCTGACAAACAAGAAGAATCATTTGATTATGTATTTGTGGACGCGGACAAGGCAGAATACATTAAGTATCACGAGCTGCTTCTGAAATTGGTGAAGAAGGGTGGAATTATTGCATACGACAATACCTTATGGTATGGTTCAGTGGCCATGCCTGAGGAAAACGTAAAAGAAGACATCATAAGGAAGAAAAGAACGCCTTTGATTCAATTCAACAACTTCATCGCAAACGATGCTCGCTTGGAATCAGCCATTGTTTCACTTGGGGACGGCATAACCTTCTGTAGACGTCTGTGA | 708 | 0.4237 | MEGDTLNKNILQSPALLEYILKTSGYPKEHEQLRLLRETTVQKYKEDIYLMNVPVDEAQFMSILLKIMNAKKTLEIGVFTGYSLLATALALPDDGKITAVDVDRDAYEVGLPFIQKAGMEHKIDFIHGDASSVLNDLLADKQEESFDYVFVDADKAEYIKYHELLLKLVKKGGIIAYDNTLWYGSVAMPEENVKEDIIRKKRTPLIQFNNFIANDARLESAIVSLGDGITFCRRL* | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr2g1682 | 235 | PANTHER | O-METHYLTRANSFERASE-RELATED | 6 | 235 | - | - | |
| Apr2g1682 | 235 | CDD | AdoMet_MTases | 74 | 177 | - | - | |
| Apr2g1682 | 235 | Pfam | O-methyltransferase | 23 | 235 | IPR002935 | GO:0008171 | |
| Apr2g1682 | 235 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 14 | 234 | IPR029063 | - | |
| Apr2g1682 | 235 | PANTHER | FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE | 6 | 235 | - | - | |
| Apr2g1682 | 235 | Gene3D | Vaccinia Virus protein VP39 | 2 | 235 | IPR029063 | - | |
| Apr2g1682 | 235 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 235 | IPR002935 | GO:0008171 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr2g1682 | Apr-Chr2 | 22486134 | 22488556 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Apr2g1682 | 1 | 235 | Monolignol Biosynthesis Gene Families | AT1G67990 | 53.191 | 3.47e-86 | 253 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr2g1682 | K00588 | K13272 | gmx:100500657 | 375.555 |