Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1665 ATGACACCTGGTTACGACTACGATATTAATGATCTTCATCAAGAAGCTCAAGCCAGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTTCCAGTTCACCCAAGAGCCCCCACAACAGCCCACAAATGGATCCCTGTTTCTGTTTAACAAAAGAGTCCTGCGTTTTTTCCGTAAAGATGGTCATAACTGGCGCAAGAAAAGAGACGGAAGAACTGTGGGAGAAGCACATGAACGGTTGAAGGTTGGAAATGTTGAAGCCCTAAATTGTTACTATGCACATGGAGAGCAGAACCCTAATTTCCAGAGGCGGAGTTATTGGATGTTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTATAGAGACACAAGCGAGGGAAGGAACAGTTCTGGAGCTGGCGCACAATTGTCGCCAGGTTCCTCCTCTGTGTTTAGTCAGAGTCCTAGCCCATATTCTACTCAGAATCCAGGGTCAATGTCCATGCTTGGTGATTCATATGAACCTTATCAGAGTTTCTCCAGTCCTGGATCAGCAGAAGTTACCTCTGATGCGTTCATTCTAAACAATGGAATGGGTCACTTGGATGGAACAGATGCAGAATCAGGAACCTCAACTGAACTGGAGGTTACTCAAGCTTTGCGCCGATTGGAGGAGCAGTTAAGTTTGAACAAGGACAAGTTTGAAGATATTGCTGCCTTCAGCAATAAGCATGAAACTGCTCATGATTCAGACCCTCAGCAAAATCCAGGAGTGATCAGCAAGCAAGAGCAATCTGCATCTTTCTCCAGACCAGATGATCAGGGGATGTTTTATAATGGAAGGCAAGGTGATGGTGGTGAATGTTATCATGAATTAATAGACCATGGTTGCCCTGGTCGAAATGAAAAGGCTGTATGGACAGAGGTGCTGGAATCATGTAAGTCCTCATCCACAAACAAGTTACCACGGAAAAATCTATACATGCTAGATGGAAATGAAAATTCACCATCTCCTTTGAGAAGGGAAGAAGTTGCCAATCAGGAAAACAGTAACTGGCTAAACTTCAACAGCAATAATGCTGAAAACTCCATTTTCTCACTACCTCAAGGCATTGGTGGAGTCAAGTTTCCTCAATATTCTTCTATGGTAGAAACACAAGAAATTAATTCTGACTACTATGCAACATTGTTTGACCAAAGCCAAATTGGAGCACCTCTGGATTCAGATTCAAGCTTGACTGTTGCACAAAAACAGAAATTTACTATTAAAGCGGTCTCCCCAGAATGGGGTTATGCCACTGAAACTACCAAGGTCATCATTGTTGGATCTTTTCTCTGTCATCCCTCAGATTCTGCCTGGGCCTGCATGTTTGGTGATGTTGAAGTTCCTGTTGAGATAATTCAGGATGGTGTAATTTGTTGTGAAGCTCCATCTCACCTTATTGGAAAGGTTACTCTGTGCATTACCTCTGGAAACCGGCAGTCCTGCAGTGAAGTCAGAGAGTTTGAATATCGCAATAAGACCAATAGTTGCACCCACTGTACTCAATTGGAAACAGAACCCACTAGAAGTCCAGAAGAGCTGTTATTACTTGTTCGGTTAGGACAGATGCTTCTTTCTGCATCAACTGAAAAGGATGACAGCATAGATTCTAGAATTCCTCTCATAAAACAGAAAGCTGATGATGATTCTTGGAGCCATATAATAGAGGCGCTTCTATTTGGCAGCGGAACCTCATCTGGTGCTATGGATTGGCTTCTTGAAGAGCTTTTAAAGGATAAGATGGAACTGTGGCTTTCTTGCAGATCCCAGGAAAAAGATGAAGAGACAGGCTGTTCTTTGTCCAAGAAAGAACAGGGTATTATTCATATGGTTGCTGGGTTGGGCTTTGAATGGGCCTTGAACCCTATTCTCAGTTGTGGAGTGAATATAAATTTCCGTGACATCAATGGGTGGACTGCTCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGAGCATCTGCTGGGGCTGTGACAGATCCTAGTGCACATGATCCAATTGGTAAAACGGCTGCATCTATTGCAGCCAGCAGTGGGCACAAGGGACTGGCAGGGTATCTTTCAGAGGTAGCAGTAACAAGCCATCTGTCATCTCTTACATTGGAAGAGAGTGAGCTATCTAAAAGTTCTGCTGAGCTTCAAGCGGATATTACGGTTAGTAGTGTCTCCAAGGAAAATCTCACTGCCAGTGAGGATCAGACTTCGCTCAAAGATACCTTGGCTGCTATTAGAAATATAACTCAGGCAGCTGCACGGATACAAGCTGCTTTCCGCTCTCATTCATTTAGAAAACAAAGAGCGAGAGAAGCAGTTGCTGGTATAGATAGATATGGTATGAGTGCAGGTGGTACTGGTAACATTCCAGAGCTTTCTGCTATGTCAAAACTTGTCTTTCGGAATGCACGTGATTATAATTCAGCTGCCTTATCAATTCAGAAGAAATATCGAGGATGGAAAGGTCGCAAAGATTTCTTAGCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCACTACAAGGTAATATGGGCAGTTGGAATTTTGGACAAGGTTGTGCTACGATGGAGAAGAAAAGGAACTGGTTTACGAGGTTTCAGACAAGAGATGGACATTAATGAAAATGAAGATGAAGACATTCTTAAGGTGTTCCGAAAACAGAAAGTGGATGTAGAAATTGAAGAGGCTGTTTCACGGGTGCTGTCCATGGTTGACTCCCCGGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAATATCGTCAAGCTAAGGCTGAACGTGCGGGTACGAGTGAAGAAGCATCATCAACTTCTATAGGAGGCGCTTTGAATATGGAAGATGATTTTTATCAATTTCCATAA 2946 0.4321 MTPGYDYDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTNGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYRDTSEGRNSSGAGAQLSPGSSSVFSQSPSPYSTQNPGSMSMLGDSYEPYQSFSSPGSAEVTSDAFILNNGMGHLDGTDAESGTSTELEVTQALRRLEEQLSLNKDKFEDIAAFSNKHETAHDSDPQQNPGVISKQEQSASFSRPDDQGMFYNGRQGDGGECYHELIDHGCPGRNEKAVWTEVLESCKSSSTNKLPRKNLYMLDGNENSPSPLRREEVANQENSNWLNFNSNNAENSIFSLPQGIGGVKFPQYSSMVETQEINSDYYATLFDQSQIGAPLDSDSSLTVAQKQKFTIKAVSPEWGYATETTKVIIVGSFLCHPSDSAWACMFGDVEVPVEIIQDGVICCEAPSHLIGKVTLCITSGNRQSCSEVREFEYRNKTNSCTHCTQLETEPTRSPEELLLLVRLGQMLLSASTEKDDSIDSRIPLIKQKADDDSWSHIIEALLFGSGTSSGAMDWLLEELLKDKMELWLSCRSQEKDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSAHDPIGKTAASIAASSGHKGLAGYLSEVAVTSHLSSLTLEESELSKSSAELQADITVSSVSKENLTASEDQTSLKDTLAAIRNITQAAARIQAAFRSHSFRKQRAREAVAGIDRYGMSAGGTGNIPELSAMSKLVFRNARDYNSAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGTGLRGFRQEMDINENEDEDILKVFRKQKVDVEIEEAVSRVLSMVDSPDAREQYHRMLEKYRQAKAERAGTSEEASSTSIGGALNMEDDFYQFP* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1665 981 MobiDBLite consensus disorder prediction 243 280 - -
Apr2g1665 981 SUPERFAMILY Ankyrin repeat 618 711 IPR036770 -
Apr2g1665 981 Pfam Ankyrin repeats (3 copies) 631 709 IPR002110 GO:0005515
Apr2g1665 981 ProSiteProfiles Ankyrin repeat profile. 649 681 IPR002110 GO:0005515
Apr2g1665 981 Gene3D Immunoglobulins 414 509 IPR013783 -
Apr2g1665 981 ProSiteProfiles Ankyrin repeat region circular profile. 649 675 - -
Apr2g1665 981 ProSiteProfiles IQ motif profile. 848 873 IPR000048 GO:0005515
Apr2g1665 981 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Apr2g1665 981 PANTHER CALMODULIN-BINDING PROTEIN 1 980 - -
Apr2g1665 981 ProSiteProfiles IQ motif profile. 767 793 IPR000048 GO:0005515
Apr2g1665 981 Pfam IQ calmodulin-binding motif 850 869 IPR000048 GO:0005515
Apr2g1665 981 Pfam IQ calmodulin-binding motif 827 845 IPR000048 GO:0005515
Apr2g1665 981 ProSiteProfiles IQ motif profile. 825 854 IPR000048 GO:0005515
Apr2g1665 981 SMART ANK_2a 649 678 IPR002110 GO:0005515
Apr2g1665 981 SMART ANK_2a 688 717 IPR002110 GO:0005515
Apr2g1665 981 SUPERFAMILY E set domains 420 504 IPR014756 -
Apr2g1665 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 815 871 IPR027417 -
Apr2g1665 981 CDD IPT 420 504 - -
Apr2g1665 981 MobiDBLite consensus disorder prediction 250 271 - -
Apr2g1665 981 Gene3D - 825 873 - -
Apr2g1665 981 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Apr2g1665 981 Gene3D - 535 714 IPR036770 -
Apr2g1665 981 SMART CG_1_2 12 130 IPR005559 GO:0003677
Apr2g1665 981 Pfam IPT/TIG domain 420 503 IPR002909 -
Apr2g1665 981 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 980 - -
Apr2g1665 981 MobiDBLite consensus disorder prediction 130 181 - -
Apr2g1665 981 SMART iq_5 766 788 IPR000048 GO:0005515
Apr2g1665 981 SMART iq_5 847 869 IPR000048 GO:0005515
Apr2g1665 981 SMART iq_5 824 846 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1665 Apr-Chr2 22315240 22323287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1665 5 958 CAMTA Transcription Factor Family AT1G67310 53.260 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Apr2g1665 CG-1 4.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1665 K21596 - gmx:100786880 1585.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2317 10 35150953 35159274 Apr2g1665 2 22315240 22323287 PCT