Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr2g1652 | ATGGAGGACGATTTCGAGTTCCCAAGTGCTGGCAACATGGAAATGGGTGAGGCTGATGAAATGGAGATGGAGAGTTCGGTTCTGAAGGTTGGTGAGGAGAAGGAGATTGGGAAGAAGGGATTGAAGAAGAAGCTGTTGAAGGAAGGTGAAGAAGGGTGGGACACCCCTGACATTGGCGATCAAGTTGAAGTGCATTATACAGGAACCTTGCTTGATGGAACCCAATTTGATTCTAGCCGTGACAAGGGTACCCCTTTCAAGTTCAAGCTTGGCCAAGGGCAAGTGATCAAAGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCCCTTTTCACAATACCTCCAGAATTGGCTTATGGAGAGTCTGGGTCTCCTCCCACTATTCCCCCTAATGCTACTCTTCAGTTTGATGTGGAGTTGCTGTCTTGGACTAGTGTCAAGGACATTTGCAAGGATGGAGGAATATTAAAGAACATAATCACTGAAGGGGAGAAATGGGATAATCCTAAGGAGCTGGATGAAGTGTTTGTTAAGTATGAAGCTAGGCTTGAAGACGGGACAATCATTTCAAAATCTGATGGAGTGGAATTCACTGTGGAAGAGGGGTATTTCTGTCCTGCTTTGGCAAAGGCTGTGAAAACAATGAAAAAGGGAGAGAAAGTTCTATTGAATGTGAAGCCACAATATGCATTTGGTGACAGTGGAAGGCCAGCATCAGCAGATGCAGGTGCTGTACCTCCAAACGCTTCACTCCGGATTGATCTTGAGTTAGTTTCGTGGAAGACAGTGTCTGACATTACCAAGGATAGGAAGGTTCTCAAGAAGACGTTGAAGGAAGGAGAGGGATATGAACGACCGAATGATGGAGCTGTAGTTCAAGTGAAACTGATTGGCAAGCTGCAAGATGGAACTGTTTTCCTTAAGAAGGGTTACGATGATGAATCATTCGAGTTCAAAATTGATGAAGAGCAAGTAATTGAGGGACTTGATAAGGCGGTAAAGAACATGAAGAAAGGGGAAATTGCATTGGTGATCATACAGCCTGAATATGCTTTTGGTCGATCTGGCTCCACTCAGGAATTGGCTAATGTTCCTCCGAATTCCACTGTGTGCTATGAAATTGAGCTGCTTTCCTTCGTAAAGGAAAAAGAATCATGGGATTTGAATACACAAGAGAAAATTGAAGCAGCTGGGAAGAAAAAGGAAGAAGGAAATGCTTTGTTCAAGGCTGGTAAATATGAAAGAGCATCTATGAGATATGAAAAGGCCATAAAGTTTATCGAGTACGATTCCTCCTTCAATGATGAGGAGAAACAACAAACTAAGGCATTGAAAATCACATGCAATCTAAATAATGCAGCCTGCAAATTGAAACTCAAGGACTACAAACAGGCAGAGAAGTTGTGCACAAAGGTGTTGGAACTTGATAGTAGGAATGTGAAAGCCCTATACCGGAGGGCGCAAGCATATATTCAACTTGTGGACTTGGACCTAGCTGAGTTTGATATTAAGAAAGCCCTTGAGATTGAACCAGACAATAGGGATGTGAGGATTGAGTACAAAATTTTGAAGGAGAAAGTGAGAGAATGCAACAAGAAGGACGCACAGTTTTACGGCAGCATATTCGCAAAAATGAATAAATTAGAACAAGCAAGAACTACGACAGTTGATAGTAAAGCTTAA | 1692 | 0.4255 | MEDDFEFPSAGNMEMGEADEMEMESSVLKVGEEKEIGKKGLKKKLLKEGEEGWDTPDIGDQVEVHYTGTLLDGTQFDSSRDKGTPFKFKLGQGQVIKGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKNIITEGEKWDNPKELDEVFVKYEARLEDGTIISKSDGVEFTVEEGYFCPALAKAVKTMKKGEKVLLNVKPQYAFGDSGRPASADAGAVPPNASLRIDLELVSWKTVSDITKDRKVLKKTLKEGEGYERPNDGAVVQVKLIGKLQDGTVFLKKGYDDESFEFKIDEEQVIEGLDKAVKNMKKGEIALVIIQPEYAFGRSGSTQELANVPPNSTVCYEIELLSFVKEKESWDLNTQEKIEAAGKKKEEGNALFKAGKYERASMRYEKAIKFIEYDSSFNDEEKQQTKALKITCNLNNAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEFDIKKALEIEPDNRDVRIEYKILKEKVRECNKKDAQFYGSIFAKMNKLEQARTTTVDSKA* | 564 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr2g1652 | 563 | MobiDBLite | consensus disorder prediction | 22 | 54 | - | - | |
| Apr2g1652 | 563 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 271 | - | - | |
| Apr2g1652 | 563 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 273 | 382 | - | - | |
| Apr2g1652 | 563 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 383 | 553 | - | - | |
| Apr2g1652 | 563 | Coils | Coil | 516 | 536 | - | - | |
| Apr2g1652 | 563 | Gene3D | - | 265 | 385 | IPR046357 | GO:0003755 | |
| Apr2g1652 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 292 | 383 | IPR001179 | GO:0003755 | |
| Apr2g1652 | 563 | ProSiteProfiles | TPR repeat profile. | 483 | 516 | IPR019734 | GO:0005515 | |
| Apr2g1652 | 563 | Pfam | Tetratricopeptide repeat | 461 | 519 | - | - | |
| Apr2g1652 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 171 | 261 | IPR001179 | GO:0003755 | |
| Apr2g1652 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 286 | 380 | IPR001179 | GO:0003755 | |
| Apr2g1652 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 55 | 144 | IPR001179 | GO:0003755 | |
| Apr2g1652 | 563 | Gene3D | - | 149 | 264 | IPR046357 | GO:0003755 | |
| Apr2g1652 | 563 | Gene3D | - | 8 | 148 | IPR046357 | GO:0003755 | |
| Apr2g1652 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 175 | 264 | IPR001179 | GO:0003755 | |
| Apr2g1652 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 147 | IPR001179 | GO:0003755 | |
| Apr2g1652 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 271 | - | - | |
| Apr2g1652 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 383 | 553 | - | - | |
| Apr2g1652 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 273 | 382 | - | - | |
| Apr2g1652 | 563 | SUPERFAMILY | FKBP-like | 151 | 267 | - | - | |
| Apr2g1652 | 563 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Apr2g1652 | 563 | SMART | tpr_5 | 483 | 516 | IPR019734 | GO:0005515 | |
| Apr2g1652 | 563 | SMART | tpr_5 | 449 | 482 | IPR019734 | GO:0005515 | |
| Apr2g1652 | 563 | SMART | tpr_5 | 400 | 433 | IPR019734 | GO:0005515 | |
| Apr2g1652 | 563 | SUPERFAMILY | FKBP-like | 266 | 400 | - | - | |
| Apr2g1652 | 563 | SUPERFAMILY | TPR-like | 389 | 548 | IPR011990 | GO:0005515 | |
| Apr2g1652 | 563 | SUPERFAMILY | FKBP-like | 33 | 152 | - | - | |
| Apr2g1652 | 563 | Gene3D | Tetratricopeptide repeat domain | 386 | 543 | IPR011990 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr2g1652 | Apr-Chr2 | 22171660 | 22174434 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Apr2g1652 | 28 | 563 | Calmodulin-binding Proteins | AT5G48570 | 74.679 | 0.0 | 832 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr2g1652 | K09571 | - | gmx:100810243 | 962.214 |