Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1650 ATGCAAAACCGAACATTCGAGTTCAGACACTTAATGCAATTCCTCAAGTTACACCCTCCTCTTTTATGTCCTTTAAATAATTTGTTTTCTTACTCTTGTTTGAATCACTTGTTTCTTTCGCCATTTTCTACTAGCTCTTTATCAACCCAACGCCGAAGATCAAAGGTGGACACTCTCTTAATTGATTACCTAAATGCCAAGTTCAAATTCTCAAGAAATCAATCCATTTTTATTTCAAAACATGTTTCAGGACACAGTTTCCCTCAAAAGCCCTTGTCTGTGCTCAGTTTTTTCGAACAAATTGGGTTTTCTGAAACTCAGATTCTGTCTATGATTCGTCAGAAACCCCAGATACTGTTTTCAGATGTTGATAAAACCTTGAGACCCAAAATTAAGCACCTTCAACTTTTGGGTTTCGAGGCTTCTGACTTATGCAACTTCATTTCCAACAATTCAACCCTTTTGACTTCTAGTCTGAAGAAATCACTGGTCCCATCTGTGGAAGCTATTAGGAAAATTGTGTGCAACGAGAACGATTTTATTCATGTTTTGCACAGATGTGGATGGATACTCCCAAAGTACCAAAAGTTTATGGACAATGTTATCTTCTTGCAGAGTTGTGGCATTGTTGGGTCTCAGCTTTCAATGCTTCTCAAACAGCAGTCAAGGCTTTTCGTTGCACCACAATCTACTATTAGAAAGCATGTTTCACGTGCTGTGGACATGGGTTTTGATGAAAATTCAAGAATGTTAGTACATGCAATTCATACAATATCTGGTTTGAGCTATAAAACCTTTGGGAGAAAGCTAGAGCTAATTAACTGTTTTGGGTTTTCTAAGGATGAGAGCTTGCAAATGTTCAAAAGATCTCCAAGTTTGCTTAGAACATCAGAGAAGAAATTAAAGGTTGGATTGGAATTCTTCTTGCATACAGTTATGTTGCCAAAGTTGGTGTTGGTTCGTAGGCCTATGATTTTAATGTATAGCATGGAGGATCGGATTCTTCCTCGATATAGAGTCTGGCAGCTCATAATATCAAGAAAACTGTGTAAGAAGGTCCCTAGTTATATTAATGTGTTATATTTGTCTGAAGAGGAGTTCTTGTACAAGTATATAACAAGGTTCAGAGAAAATGCAGTGGAATTATTAGTAGCTTACAAGGGTCATCATTTAGAAACATAG 1182 0.3706 MQNRTFEFRHLMQFLKLHPPLLCPLNNLFSYSCLNHLFLSPFSTSSLSTQRRRSKVDTLLIDYLNAKFKFSRNQSIFISKHVSGHSFPQKPLSVLSFFEQIGFSETQILSMIRQKPQILFSDVDKTLRPKIKHLQLLGFEASDLCNFISNNSTLLTSSLKKSLVPSVEAIRKIVCNENDFIHVLHRCGWILPKYQKFMDNVIFLQSCGIVGSQLSMLLKQQSRLFVAPQSTIRKHVSRAVDMGFDENSRMLVHAIHTISGLSYKTFGRKLELINCFGFSKDESLQMFKRSPSLLRTSEKKLKVGLEFFLHTVMLPKLVLVRRPMILMYSMEDRILPRYRVWQLIISRKLCKKVPSYINVLYLSEEEFLYKYITRFRENAVELLVAYKGHHLET* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1650 393 SMART mt_12 215 245 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 SMART mt_12 316 348 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 Pfam mTERF 95 247 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 Pfam mTERF 195 368 IPR003690 GO:0003690|GO:0006355
Apr2g1650 393 PANTHER EMB|CAB62602.1 47 389 - -
Apr2g1650 393 Gene3D Transcription termination factor 3, mitochondrial 196 377 IPR038538 -
Apr2g1650 393 Gene3D Transcription termination factor 3, mitochondrial 69 195 IPR038538 -
Apr2g1650 393 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Apr2g1650 393 PANTHER CGI-12 PROTEIN-RELATED 47 389 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1650 Apr-Chr2 22158825 22160889 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g1650 mTERF 6.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1650 K15032 - vvi:100268158 323.939