Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1638 ATGGATACTAATTCAAGAAACTTGAGATGGGCAAGAAAGGCCCAATTGCTTGTAGCTTGTGCTCTTCTTTTACTGCAAAACTCTCTGGTCATCTCTATAGAGACAACAACCTCTGTGCATATTGTGTACATGGGAGATAAGATATATCAAAATCCAGAAACTACTAAAAAGTATCACCGCAAAATATTATCTTCACTTTTAGGAAGCTATAAGCATGGTTTTTCAGGCTTTGCTGCAAGATTGACAAAATCTCAAGCAGAAGCAATAGCAAAGTTTCCAGGGGTAGTTTCTGTCATTCCAAATGGTATTCACAAACTCCATACAACTAGAAGTTGGGACTTTATTGGGATCCATTATTCCTCCTCAAAAACTTCTTTCACTGACAGCAACTTAGGTGAAGGAACCATCATAGGTGTTATAGACACAGGCATTTGGCCAGAATCTCCAAGTTTCAATGATGAAGCAATGGGACAAATCCCATCAAGGTGGAAAGGAGTTTGTCAAGTGGGAGAGCACTTCAACTCCACCAATTGCAACAAAAAGATAATTGGTGCTAGATGGTTCATGAAAGGAATAACTGATCAGACTAAGAAACTCCTCAAAGGAAATAACACTAAGGAATATCTCTCAGCAAGAGATGCTATTGGCCATGGCACTCATACAGCTTCAACAGCAGCTGGGTATTTTGTAGGAAATGCAAATTATAGAGGACTTGGTTCTGGTTTGGCCAAAGGAGGAGCACCATTGGCTCATTTAGCTATCTACAAGGCTTGTTGGGACTTTCCTATTGGAGACTGTACTGACGCTGATATCCTTAAAGCTTTTGACAAGGCTATACATGATGGAGTAGATGTCTTAACTGTTTCTCTTGGCTTTGCCATTCCCTTGTACTCCTATGTTGATCAACGTGACACAATAGCTATTGGTTCCTTTCATGCAACTGCCAAGGGAATCACAGTTGTCTGTTCAGCTGGAAATTCTGGTCCTGCGTCTCAAACCATTACAAATACTGCACCATGGATTATTACAGTTGCAGCCACCACAATAGATAGGGCCTTTCCGGCAGCCATCAACCTTGGGAAAAACCGCACTGTGTGGGGACAATCCATTGATACTGGAGCACATAATCTTGGATCTGTTGGGCTCACATATTCTGAACGCATTGCTCTAGACCCATCAGATAATTTGGCCAAGGATTGTCATTCTGGAAGTCTAAATGCGTCAATGGCAGCAGGCAAAATTGTTCTATGCTTTTCACTATCAGATCAACAAGACATTGTTTCTGCATCACTCACAGTCAAGGAAGCTGGAGGAGTTGGACTGATATATGCACAATATCATGAAGATGGACTCGATGGTTGTGGTTTGTTTCCATGTATTAAGGTAGATTATGAAGTCGGGACTGAAATATTAACCTATATTAGAAGAGCAAGGTTTCCAACTGCAAGCCTGAGTTTTCCAAAGACTGTCATTGGAAAATTGATATCTCCAAAAGTTGCATCTTTCTCAGCTAGAGGACCAAGTAGCATGTCTCCAACAGTCCTAAAGCCTGACATAGCTGCTCCAGGTGTGGACATTTTGGCTGCATTTCCACCAAAGGGCACTACAAAGAGCAGTGGATTTGCTTTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTGGCAGGGATTTCAGCTCTCATCAAATCCAAGCACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCCTCTCAAACTGGAACTGATGGAAGCATTATATCTGAAGAGGGTTCCACAAATAAAGCAGCAGACCCATTTGATATAGGAGGTGGATTTGTGAACCCCGACAAAGCAATGGATCCAGGACTCATATATGATGTAATCACTGAGGATTATATCCAATTCCTATGTTCCATGGGTCACAGTAGTGCATCCATTAGCGAAGTGACCAATACCACCACACGTTGTAAGAAAGTAAAACACCAAGCACTGAACCTTAACCTTCCTTCCATATCAGTTCCAAACTTGAAGAGGGCTACAACAGTAATGAGAACGGTGACAAATGTTGGAAACATAACTGCAGTCTACAAAGCTCTAGTGAAGGTTCCATATGGCATAAAAGTGAGTGTTGAACCTACAATTTTGAATTTCAGTTCAAACACCCGAGTCCTTACCTTCAATGTCAGTTTCATGTCAACTCAAAAGTTGCATGGAGATTACAAATTTGGGAGCTTAACATGGACTGATGGCAAGCATTTTGTGAGGACTCCAATAGCTGTGAGAACCAAACAGTTTGAATCTTAA 2298 0.4151 MDTNSRNLRWARKAQLLVACALLLLQNSLVISIETTTSVHIVYMGDKIYQNPETTKKYHRKILSSLLGSYKHGFSGFAARLTKSQAEAIAKFPGVVSVIPNGIHKLHTTRSWDFIGIHYSSSKTSFTDSNLGEGTIIGVIDTGIWPESPSFNDEAMGQIPSRWKGVCQVGEHFNSTNCNKKIIGARWFMKGITDQTKKLLKGNNTKEYLSARDAIGHGTHTASTAAGYFVGNANYRGLGSGLAKGGAPLAHLAIYKACWDFPIGDCTDADILKAFDKAIHDGVDVLTVSLGFAIPLYSYVDQRDTIAIGSFHATAKGITVVCSAGNSGPASQTITNTAPWIITVAATTIDRAFPAAINLGKNRTVWGQSIDTGAHNLGSVGLTYSERIALDPSDNLAKDCHSGSLNASMAAGKIVLCFSLSDQQDIVSASLTVKEAGGVGLIYAQYHEDGLDGCGLFPCIKVDYEVGTEILTYIRRARFPTASLSFPKTVIGKLISPKVASFSARGPSSMSPTVLKPDIAAPGVDILAAFPPKGTTKSSGFAFLSGTSMSCPHVAGISALIKSKHPTWSPAAIRSALVTTASQTGTDGSIISEEGSTNKAADPFDIGGGFVNPDKAMDPGLIYDVITEDYIQFLCSMGHSSASISEVTNTTTRCKKVKHQALNLNLPSISVPNLKRATTVMRTVTNVGNITAVYKALVKVPYGIKVSVEPTILNFSSNTRVLTFNVSFMSTQKLHGDYKFGSLTWTDGKHFVRTPIAVRTKQFES* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1638 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Apr2g1638 765 Pfam Peptidase inhibitor I9 61 107 IPR010259 -
Apr2g1638 765 SUPERFAMILY Subtilisin-like 106 621 IPR036852 GO:0004252|GO:0006508
Apr2g1638 765 Pfam Subtilase family 132 584 IPR000209 GO:0006508|GO:0008236
Apr2g1638 765 Gene3D Peptidase S8/S53 domain 134 630 IPR036852 GO:0004252|GO:0006508
Apr2g1638 765 Gene3D - 350 491 - -
Apr2g1638 765 Pfam Fibronectin type-III domain 663 758 IPR041469 -
Apr2g1638 765 CDD PA_subtilisin_like 357 484 - -
Apr2g1638 765 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Apr2g1638 765 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Apr2g1638 765 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Apr2g1638 765 ProSiteProfiles Serine proteases, subtilase domain profile. 111 617 - -
Apr2g1638 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 107 IPR037045 -
Apr2g1638 765 PANTHER PEPTIDASE S8 19 764 - -
Apr2g1638 765 Gene3D - 634 761 - -
Apr2g1638 765 CDD Peptidases_S8_3 104 582 IPR034197 -
Apr2g1638 765 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 19 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1638 Apr-Chr2 22072491 22077243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1638 34 765 Subtilisin-like Serine Gene Family AT1G32960 50.601 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1638 - - gmx:100792709 1363.98