Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1611 ATGGCGGAATCAAACTCAGTTGATGTGATTTTGGACTTTCTCAAGAGGAATCGATTCACTAGAGCTGAGGCTGCTCTGCGCAGTGAGATTAATAATCGTCCTGACTTGAATGGCTTTCTACAGAAGCTTACATTGGAAGAAAAAGCCTTACGAGATGCGCCTCAAAATAGTAAGGGAAAGCCCGTGCTTGAGGTTCAAGGGGTAGAATCTCATGATGGTGTTGAAGTTTCTAAAGAACTGATTGTGAAAGAAATAGAGTGTGGGACTGGTCGAAACGCCACTGAAAGCAAATGGAAAGCTACTGTTCCTTCTGCGGTGGAAAGGAATAAGTCGAAGGAAGTGGTTGGGGCAAGTGAAAAGAACTTCACTTTCTCTAAGAGTTCGGAGGATGGTCCCCTTGATTTATATTCATGGAAGTTTAACCCCAGTAATGGTCCCTTGGAGCCTTACCAAAATGATGGTGGTAGTAGGGCTAATAATACTTTGAAGACCTCTGTATCTCAACAATCAAAATATCAAACTAATGAAGGTGTTGATGCAATTGCAGCCAGTACCAATTCAAAGTTTGGGGAGGAGAATGCCATGCTTGCTAATAACAAATCCTTGTGGCCTGAAAGTAGTAGTAAAGCCCTTGTGGATCCTAAGTATGACCTCGTGCAAAGCAAAGAACCCAGGGAACTTGATTGGCAGCTTAAATTCAATGATTCATCTCTTAAAGTGAACTTTACAGATAATCCCTGGTCAAGAACAGATGAGAATGCAAATTCGTCTTCAGACTCGTGCAAAGACTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAAGGAGGGGATAAGTCTACAAGCTTTGGTGATGCAACTTATTCTGACAAAAAAGAGGAGAAAAGAAGGGTAGAAGTTACTGATATTAGGACATCTATAAAAGAACAGGTGGATGAGATGGGGAGAGCTATATACTCAGGCAAGTCACAAGGTAGTTCTGAACAGAAAATGATTGGCAGCTTAAGTTTTCCTATTCCACCTGAAAATCAGAAGGAAGAGTTCCCTAGGCTTCCTCCAGTTAAACTCAAGTCAGATGATAAGCCCTTGATCGTTAACTGGGAGGAGAAGTTTGAGCGAGATGGACCAACTTCAAAACTTGCTGGTGCTGATAACACTTTGCTTATTGGTTCATATCTAGATGTACCTATTGGACAAGAAATCAATCCATCAGGTATGAGGAGGCCTGCTGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATTGCGGAGGATACTTCTGATCTTGTATCGGGTTTTGCAACAGTTGGTGATGGGTTGAGTGAATCTGTTGACTATCCAAATGAATACTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAAGCCTGGTTTTTGGCACATGAAATTGATTACCCCAGTGACAATGAAAAGGGGACTGGGCTTCGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCGATATCTTCAGGCAAATAATGTGGAACCGGTCACTGCTACCGATGATCCTATTGGTCTAACAGTTACCGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAATCTGATGTGTGCAGAGCCTGTCTGGCGAGGCTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGCCATGGGAGGGTTTTGAATGATAATGTAAGATCACGACTAGACGATACCTGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTGGGGATCAACAGTGATGCTGCAGATATTGGCAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCGTGATCGTGATGTTGGGCTTGGGCTTGGTGGTTCCAGACACTCTCATCATGATTTTGATAAGAAGTCTACCAACAAATCAAACAAAAACATGAACAATGAAAAGAGTGAGTCAAATAAATACGTCATAGGATGTGATAACGATGCTCAGTTGCACGTGAAAACTCATGGTGATGGAAACTTCTCATTTCCCCTAACATTGAAGGATGGCCAGATGATTCAGGCTGCCTCCAATAATCCCCTGTGGTCAAATAACTGCAATGTTGATGAAACTGATGACTGTCTTAATGCATTTGTGGGAACTGATGACATGCTTGCTTCGTGGAGGCGGAAGAGCAGTGATTCATCACCTATCAAAAGTTCTAGGGATGAAAATCATGCTAACTTGGTAAGATCCACAAACTCTTCTCCGACAACAGTCTCAAACTATGGATATTCTGAAAGAGAACATGTGAAGCTTGAAGAGGATGTAAAGGCTGGAATTGTCAGGGAAGATGATCTTGGAGCATCGCTAGAGGATGAAGAGGCAGTTGCTGTACAAGAACAAGTAAGGCAGATCAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCACGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACAGAATATTTGGGATCTGCTGCATTTAGCAAGGCTATACAAGCTCATGACCTGCATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTGTACGAGTTTCATAAATTTAATAGAGAATCAGGGGGTGAAGTGTACTTTACAATGCCGAGATTGCAGTCCATTACCATTCAATGTTTGGAAGCACTTCAGTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTCGAGACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGTCTTCCATATGACAAGAAGATTGATATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTTCTTTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTGCAATTGATCAAAGTATGCTTGCAAAAGGACGGGACACATATAAGTACTTTACCAAAAATCACATGCTTTATGAACGGAATCAGGAAACCAACAGGTTAGAATACTTAATTCCAAAAAAGACATCATTGAGGCATAGATTGCCAATGGGAGATCAGGGCTTCATTGACTTTGTTGCTCATTTGCTCGAGGTCAACCCTAAGAAGCGGCCGTCTGCATCTGAGGCTCTGAAGCACCCTTGGTTATCATACCCTTATGAACCCATATCATCTTGA 3570 0.4151 MAESNSVDVILDFLKRNRFTRAEAALRSEINNRPDLNGFLQKLTLEEKALRDAPQNSKGKPVLEVQGVESHDGVEVSKELIVKEIECGTGRNATESKWKATVPSAVERNKSKEVVGASEKNFTFSKSSEDGPLDLYSWKFNPSNGPLEPYQNDGGSRANNTLKTSVSQQSKYQTNEGVDAIAASTNSKFGEENAMLANNKSLWPESSSKALVDPKYDLVQSKEPRELDWQLKFNDSSLKVNFTDNPWSRTDENANSSSDSCKDCSVKTVFPFSKGGDKSTSFGDATYSDKKEEKRRVEVTDIRTSIKEQVDEMGRAIYSGKSQGSSEQKMIGSLSFPIPPENQKEEFPRLPPVKLKSDDKPLIVNWEEKFERDGPTSKLAGADNTLLIGSYLDVPIGQEINPSGMRRPAGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGLRSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQANNVEPVTATDDPIGLTVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGHGRVLNDNVRSRLDDTCMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDRDVGLGLGGSRHSHHDFDKKSTNKSNKNMNNEKSESNKYVIGCDNDAQLHVKTHGDGNFSFPLTLKDGQMIQAASNNPLWSNNCNVDETDDCLNAFVGTDDMLASWRRKSSDSSPIKSSRDENHANLVRSTNSSPTTVSNYGYSEREHVKLEEDVKAGIVREDDLGASLEDEEAVAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGAIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1611 1189 ProSiteProfiles Protein kinase domain profile. 878 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1611 1189 SMART serkin_6 878 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1611 1189 PANTHER - 2 1187 - -
Apr2g1611 1189 MobiDBLite consensus disorder prediction 760 793 - -
Apr2g1611 1189 MobiDBLite consensus disorder prediction 662 679 - -
Apr2g1611 1189 Pfam Protein kinase domain 878 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1611 1189 Gene3D Phosphorylase Kinase; domain 1 872 959 - -
Apr2g1611 1189 MobiDBLite consensus disorder prediction 483 513 - -
Apr2g1611 1189 CDD PKc_DYRK_like 878 1180 - -
Apr2g1611 1189 SUPERFAMILY Protein kinase-like (PK-like) 867 1182 IPR011009 -
Apr2g1611 1189 Gene3D Transferase(Phosphotransferase) domain 1 932 1180 - -
Apr2g1611 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1004 1016 IPR008271 GO:0004672|GO:0006468
Apr2g1611 1189 MobiDBLite consensus disorder prediction 662 686 - -
Apr2g1611 1189 MobiDBLite consensus disorder prediction 778 793 - -
Apr2g1611 1189 Coils Coil 830 850 - -
Apr2g1611 1189 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1611 Apr-Chr2 21861188 21871479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1611 877 1175 MAP Kinase Gene Family AT5G19010 31.348 3.73e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Apr2g1611 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1611 - - lang:109331412 1904.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1611 2 21861188 21871479 Apr2g1611 2 21861188 21871479 ECH
Apr2g1611 2 21861188 21871479 Apr6g0946 6 14036279 14043966 PCT