Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1601 ATGGCGGGGGCGGAGGAAGGAAGGAGGAGGAGTAGACAAGACAGCGATAATCTGGAGAAGGGACACATGTCAAGGTTTAGGCGTTGTTATTATGACACACACGGCGGAGATGCAAGGCGGCAATTTGTGGTTTATCCTGATGACCGGTGGTACCTTGTGTGGAAGCACTTCATTCTGATATGGGCAGTGTACTCATCCTTCTTCACTCCAATGGAGTTCGGTTTCTTCAGAGGTTTACCGGAGAAGATATTCCTTCTCGACATCGCCGGCCAATTGGCTTTCCTCATCGACATCGTTATCCGCTTCTTCGTCGGATATCACGATGTTCACGCCAACTCCATCGTCGTCAACCGCTATCAAATCGCCATTAGGTACCTCAAGTCTCGCTTCTTCCTCGATCTCCTCGGTTGTTTCCCCTGGGATTACATCTACAAAGCCACCGGCAAGAAAGAGCTTGTTAGATACCTCCTCTGGATTCGACTTAGCCGAGCTTGGAGAGTCACCGAGTTCTTCGAGAGGTTGGAGAAGGATATTAGAGTTAATTACCTGTGTACAAGAATTGTTAAACTCTTCGTTGTTGAACTTTACTGCACTCACACTGCTGCATGTATCTTTTACTATCTCGCAACCACCATGCCTCCTTCTCAGGAAGCTTACACGTGGATCGGTAGTTTGAGGATGGGTGAATACACCTATTCTGATTTCAGACACGTGGATCTCTGGAAGCGTTACGTCACGTCGCTCTACTTCGCAATTGTTACCATGGCTACTGTTGGCTATGGAGACGTTCACGCGGTAAATGTGAGAGAAATGATATTTATTATGATTTATGTTTCGTTTGACATGATTCTCGGCGCTTACCTTCTCGGGAACATGACTGCGTTGATTGTGAAAGGATCCAAAACAGAGAGGTTTAGGGATAAGATGTCTGATATTATTAAGTATGTGAATAAGAACAACTTGGACAAGCAGATATGTCATGCTATTAAAGATCATTTGCGCTTGAAGTATGATCGCAGTTACACCGGACCTTCTGTTCTTCAGGACATACCAACCACAATTCGCGCAAAGATTTCAATCAGTTTGTATGAGAAGTTCATTCAGAGAGTTTCTCTTTTCAAGGGGTGCTCTGTAGGGTTTATAAAGCAGATTGCAACCAAAGTCCATGAAGAGTTTTTCCTCCCAGGAGAATTGGTTATGGAGGAAGGAGATGTTGCGGATCAACTTTACTTTGTATATCGTGGTGAGCTGCATGAGATAAGGAGGGAAGATGGCGACACAGAAGAGAAAATCCGATTGCATATCTATAGTTTCTTCGGCGAGGTTTCTTTTTTTTGTAATATGCCTCAAACTTCCATGGTTGAAGCTCATGAATTTTGCAAGGTTTTGCGACTTGATAAGAAATCGTTTACTGAAATACTGAAGATATACTTCTTAGACGGACGTATTATCTTGAACAACCTCCTTGAGGTAAAAGACTCGAGTCTCCAGCATAAGCTTTTGGAATCAGACTTCAACCTGACTATTGGAAACCTAGAGACAGAGCTGGCTACGAGGATGAACTGTGCTGCCAGTGATGGTCACCTTGACCTTGTGAAACGTTTGATTGGATCAGGGGCAGATCCTAATAAGACTGATTATGATGGCAGAACACCCTTGCATATCTCAGCATCAAAGGGCTATGTAGATATTTCTGGCTTTCTTCTTGAACAAGGAGTAAATATCAATTCCACAGATAAATTTGGCACCACTCCCTTGCTTGAAGCCATCAAGAACGGACATGAAGAAGTAGCATCTGTACTCGTTAATGCGGGGGCTATCCTTACTATTGATGATGTTGGAAATTTTCTCTGCACGATTGTTGCAAAGAAGGAGTTGGATCTTTTAAAAAGGGTTATGGCTTGTGGAATTAATCCAAATGCCAAAAATTACGATCAACGTACACCTCTTCACATAGCTGCCTCTGAAGGCTTGCTTACAATGGCTGAGTTACTTTTAGACGCTGGAGCTAGTGTTTTATCTAAGGACAGATGGGGAAATACACCTCTTCATGAAGCTCATACAGGTGGAAATAGAAATATGATCAAACGGCTTGAAGTTGCAAAAGTTTCACAGTTGGTTGAGTTATCCAATAGTATTCATGAAACTCAAGCAACACCAATGTTGCAATCAACAGATGAAATTTCCAAAAAGAGATGTATAGTATTTCCTTTCCACCCGTGGGTTCACAAAGAGGATAGAAAAGAGGGAGTTGTCTTATGGGTTCCGCAAAGCATTGAAGAACTTATAAAGGAGGCGATGAAACATTTGGAAATTTCAAATGGTTCATATATTTTATCAGAAGATGGTGGCAAAATTCTTTATGTAGACATGATTTACAATGATGAGAAGCTATTTCTAGTGAGTGTCTGA 2412 0.4233 MAGAEEGRRRSRQDSDNLEKGHMSRFRRCYYDTHGGDARRQFVVYPDDRWYLVWKHFILIWAVYSSFFTPMEFGFFRGLPEKIFLLDIAGQLAFLIDIVIRFFVGYHDVHANSIVVNRYQIAIRYLKSRFFLDLLGCFPWDYIYKATGKKELVRYLLWIRLSRAWRVTEFFERLEKDIRVNYLCTRIVKLFVVELYCTHTAACIFYYLATTMPPSQEAYTWIGSLRMGEYTYSDFRHVDLWKRYVTSLYFAIVTMATVGYGDVHAVNVREMIFIMIYVSFDMILGAYLLGNMTALIVKGSKTERFRDKMSDIIKYVNKNNLDKQICHAIKDHLRLKYDRSYTGPSVLQDIPTTIRAKISISLYEKFIQRVSLFKGCSVGFIKQIATKVHEEFFLPGELVMEEGDVADQLYFVYRGELHEIRREDGDTEEKIRLHIYSFFGEVSFFCNMPQTSMVEAHEFCKVLRLDKKSFTEILKIYFLDGRIILNNLLEVKDSSLQHKLLESDFNLTIGNLETELATRMNCAASDGHLDLVKRLIGSGADPNKTDYDGRTPLHISASKGYVDISGFLLEQGVNINSTDKFGTTPLLEAIKNGHEEVASVLVNAGAILTIDDVGNFLCTIVAKKELDLLKRVMACGINPNAKNYDQRTPLHIAASEGLLTMAELLLDAGASVLSKDRWGNTPLHEAHTGGNRNMIKRLEVAKVSQLVELSNSIHETQATPMLQSTDEISKKRCIVFPFHPWVHKEDRKEGVVLWVPQSIEELIKEAMKHLEISNGSYILSEDGGKILYVDMIYNDEKLFLVSV* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1601 803 Pfam Ankyrin repeats (3 copies) 522 610 IPR002110 GO:0005515
Apr2g1601 803 ProSiteProfiles Ankyrin repeat profile. 515 547 IPR002110 GO:0005515
Apr2g1601 803 SUPERFAMILY cAMP-binding domain-like 300 489 IPR018490 -
Apr2g1601 803 Pfam Ion transport protein 53 297 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr2g1601 803 Gene3D - 52 298 - -
Apr2g1601 803 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Apr2g1601 803 PRINTS EAG/ELK/ERG potassium channel family signature 87 97 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr2g1601 803 PRINTS EAG/ELK/ERG potassium channel family signature 196 206 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr2g1601 803 PRINTS EAG/ELK/ERG potassium channel family signature 244 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr2g1601 803 PRINTS EAG/ELK/ERG potassium channel family signature 288 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr2g1601 803 Gene3D - 511 612 IPR036770 -
Apr2g1601 803 ProSiteProfiles Ankyrin repeat region circular profile. 548 580 - -
Apr2g1601 803 PANTHER POTASSIUM CHANNEL AKT1 21 802 IPR045319 GO:0005249|GO:0006813
Apr2g1601 803 SMART cnmp_10 372 489 IPR000595 -
Apr2g1601 803 SUPERFAMILY Ankyrin repeat 471 698 IPR036770 -
Apr2g1601 803 ProSiteProfiles Ankyrin repeat profile. 645 677 IPR002110 GO:0005515
Apr2g1601 803 ProSiteProfiles cAMP/cGMP binding motif profile. 372 474 IPR000595 -
Apr2g1601 803 ProSiteProfiles Ankyrin repeat region circular profile. 581 612 - -
Apr2g1601 803 SMART ANK_2a 678 707 IPR002110 GO:0005515
Apr2g1601 803 SMART ANK_2a 645 674 IPR002110 GO:0005515
Apr2g1601 803 SMART ANK_2a 515 544 IPR002110 GO:0005515
Apr2g1601 803 SMART ANK_2a 548 577 IPR002110 GO:0005515
Apr2g1601 803 SMART ANK_2a 581 610 IPR002110 GO:0005515
Apr2g1601 803 PANTHER POTASSIUM CHANNEL SKOR-LIKE 21 802 - -
Apr2g1601 803 Pfam Cyclic nucleotide-binding domain 392 475 IPR000595 -
Apr2g1601 803 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Apr2g1601 803 Pfam KHA, dimerisation domain of potassium ion channel 731 800 IPR021789 -
Apr2g1601 803 PRINTS Ankyrin repeat signature 549 564 IPR002110 GO:0005515
Apr2g1601 803 PRINTS Ankyrin repeat signature 661 675 IPR002110 GO:0005515
Apr2g1601 803 ProSiteProfiles Ankyrin repeat region circular profile. 645 677 - -
Apr2g1601 803 SUPERFAMILY Voltage-gated potassium channels 46 297 - -
Apr2g1601 803 Pfam Ankyrin repeats (many copies) 635 686 IPR002110 GO:0005515
Apr2g1601 803 Gene3D - 613 716 IPR036770 -
Apr2g1601 803 CDD CAP_ED 372 485 IPR000595 -
Apr2g1601 803 Gene3D Jelly Rolls 344 503 IPR014710 -
Apr2g1601 803 ProSiteProfiles KHA domain profile. 732 803 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1601 Apr-Chr2 21759170 21765213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1601 24 677 Ion Channels AT5G37500 57.459 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1601 K21867 - gmx:100798698 1258.05