Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1596 ATGCTGCCTCACAAACGCACTCTGCTGCTTCTAGCGGCTACACTCGCGCTCACGCTTTTAGCCGAAGCAGATCTGGCTTCCGAGCGAGCCGCATTGTTGGCTCTGCGCTCAGCCGTGAGGGGTCGAACACTCTTCTGGAACGCCACCAATCAGAGCCCCTGCAACTGGGCGGGGGTCCAGTGCGAGCACGACCACGTCGTCGAGCTGCACCTCCCCGGCGTCGCGCTTTCCGGGCAAATCCCCGCCGGAATATTCGGAAACCTGACTCAGCTTCGAACCTTGAGCCTCCGTTTCAACGCCCTCACGGGTCCCCTTCCTTCAGATCTGGCCTCCTGCGTCAACCTCCGCAACCTTTACTTGCAGCGCAACTTGTTCAGCGGCCAAATCCCAACCTTCCTTTTCGACTTACCCGACTTGGTTCGTCTCAACATGGGCTTCAACAACTTCTCCGGCCCATTTCCGACGGCCTTCAACAACCTTACACGGTTGAAAACCCTCATCCTCCAAAACAACCAAATCTCGGGCTCAATCCCCGACTTGAACAAACTCAGCCTCGACCAGTTCAGCGTCTCCAACAACCTCCTCAACGGCTCAGTGCCTCTCAAGCTTCGCACATTTCCTAAAGATTCCTTTCTCGGTAACTCCCTCTGTGGCTCACCACTCTCTCCCTGTGCCGGAGATGGAACTTCTCCTACTTCTCCCTTGGCCGTTGACAATAACGAAAACGGCCAGAAGAAGAAGAAGAAGCTGTCTGGTGGTGCCATTGCTGGAATCGTTATTGGATCCGTCGTGTGTCTTCTGTTGGTTGCGTTCGTTTTGATCCTTGCGTGCAGGAACAAGAGTGATAAAAAAACCAGCGCGGTTGATGTTGCTGCTCCTGTGGCTGCTGCGGCGGCTGCGGCGATTGTGAGCAGCGTCGGCGGGGGTGGGAACAAGGCGGAGGCCAACGGCGGGGGAGCGAAGAAGTTGGTGTTTTTTGGGAATTCGGCGAGGGCGTTTGATCTGGAGGATTTGCTTAGGGCTTCGGCGGAGGTTTTGGGGAAAGGGACATTCGGGACGGCGTATAAGGCGGTTTTGGAGGCGGGGCCGGTGGTGGCTGTGAAGAGATTGAAGGATGTGACGATTTCCGAGAAGGAGTTCAAGGAGAAGATTGAAACGGTGGGAGCAATGGATCATGAGAATTTGGTCCCTCTCAGGGCTTACTATTTCAGCAGGGATGAGAAGCTCCTTGTCTATGATTACATGCCCGTCGGAAGCTTGTCTGCACTTTTGCATGGTAACAAAGGAGCGGGTAGGACGCCACTGAATTGGGAAGTCAGGTCAGGCATCGCACTTGGAGCTGCCCGTGGCATTGAGTACCTACATTTGCAAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCGAACATCCTCTTAACCAAATCCTACGATGCCAGAGTATCTGATTTTGGCCTTGCACACCTTGTTGGTCCCTCCTCTACACCCAACCGTGTTGCTGGTTACCGTGCGCCTGAGGTAACTGATCCTCGCAAAGTATCTCAAAAGGCAGATGTCTACAGCTTTGGCGTATTGCTCTTGGAACTTCTGACTGGGAAGGCACCTACTCATGCTCTCCTAAATGAGGAAGGAGTAGACCTGCCCAGATGGGTTCAATCCGTGGTCAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTACCAGAATGTTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGCAGCACAATACCCGGACAAGCGCCCTTCAATGTCTGAAGTGGCACGGACAATAGAAGAGTTGTGCCGGTCCAGCTTGAAAGAGGACCAAGACCAAATCCAACATGACCCGATCAATGACTTAGAATTATAG 1896 0.5316 MLPHKRTLLLLAATLALTLLAEADLASERAALLALRSAVRGRTLFWNATNQSPCNWAGVQCEHDHVVELHLPGVALSGQIPAGIFGNLTQLRTLSLRFNALTGPLPSDLASCVNLRNLYLQRNLFSGQIPTFLFDLPDLVRLNMGFNNFSGPFPTAFNNLTRLKTLILQNNQISGSIPDLNKLSLDQFSVSNNLLNGSVPLKLRTFPKDSFLGNSLCGSPLSPCAGDGTSPTSPLAVDNNENGQKKKKKLSGGAIAGIVIGSVVCLLLVAFVLILACRNKSDKKTSAVDVAAPVAAAAAAAIVSSVGGGGNKAEANGGGAKKLVFFGNSARAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIETVGAMDHENLVPLRAYYFSRDEKLLVYDYMPVGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHLQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVARTIEELCRSSLKEDQDQIQHDPINDLEL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1596 631 Pfam Leucine rich repeat N-terminal domain 26 61 IPR013210 -
Apr2g1596 631 SUPERFAMILY L domain-like 41 203 - -
Apr2g1596 631 SUPERFAMILY Protein kinase-like (PK-like) 344 605 IPR011009 -
Apr2g1596 631 Pfam Protein kinase domain 343 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1596 631 Gene3D Ribonuclease Inhibitor 184 224 IPR032675 -
Apr2g1596 631 CDD STKc_IRAK 346 609 - -
Apr2g1596 631 ProSiteProfiles Protein kinase domain profile. 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1596 631 Gene3D Transferase(Phosphotransferase) domain 1 415 628 - -
Apr2g1596 631 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Apr2g1596 631 PANTHER OS05G0588300 PROTEIN 294 629 - -
Apr2g1596 631 PANTHER OS05G0588300 PROTEIN 12 285 - -
Apr2g1596 631 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Apr2g1596 631 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Apr2g1596 631 Gene3D Phosphorylase Kinase; domain 1 310 414 - -
Apr2g1596 631 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 285 - -
Apr2g1596 631 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 294 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1596 Apr-Chr2 21712456 21715265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1596 24 609 Receptor kinase-like Gene Family AT1G48480 64.052 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr2g1596 Pkinase 5.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1596 - - gmx:100818955 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1596 2 21712456 21715265 Apr6g0981 6 14414152 14416954 PCT