Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1589 ATGAGTGTTGCAGATGCAGGGGAGAACTCATCTAGTGTTGAAGTGGGGGTTAGAATCTGGCTTGACCGGGGCAGGTTGTTTCTGCTCTCACCAATTCATTCATTCATATGCCATCTCATCCTTTTTATTCTCATTCTCATTCTCTCTGCCTCACATCAAACTATGTCTTCTCCCTTAGATGATTGCACAGAGCACTTATTGGATGTGGATGGCTACGCCAATGGAAATGGCACGGACCTCGCAAAGCCCAAATTCAAGATAAGAAATCTGACCAGAGTTTCTGATGATGGTGTTCTCATTCTCAAAGGCATTAACGTTGACATCCCCAAAGGTGTCATCGTGGGTGTCATAGGTCCCAGTGGAAGCGGCAAGTCAACGCTGTTAAGGGCCTTGAACCGTCTCTGGGAGCCACCCTCCTCCTCCGTCTTCCTCGACGGCGCCGACATCTGCGATCACGACGTTCTCTCCCTCCGTCGTAAGGTTGGGATGCTCTTTCAGCTCCCTGCTCTCTTCGAAGGCACGGTTGCAGACAATGTGAGATATGGACCACAACTGAGAGGGAAAAAGCTAACCGATGATGAGGTGCGCAAGTTGCTGATAATGGCGGACCTAGATGCTTCTTTCATGGATAAATCCGGGGCTGAACTCTCTGTGGGTCAAGCTCAAAGAGTAGCACTTGCCAGGACCTTAGCTAATTCACCAGAGGTTTTGCTGCTGGATGAGCCAACTAGTGCGTTGGATCCAATATCCACGGAAAACATAGAGGATGCCCTGATGAAGCTGAACAAGAATCGGAGCATAACAGTGATCATGGTCTCTCATAGCATCAAACAAATCCAGAGGATTGCTGACATAGTCTGTTTGCTTGTTGATGGTGAAATTGTTGAAGTTCTCAAGCCTGATAAACTCTCTGAAGCCAAGCATCCAATGGCACAGAGGTTTCTTCAACTCAGTTCTTAG 960 0.4792 MSVADAGENSSSVEVGVRIWLDRGRLFLLSPIHSFICHLILFILILILSASHQTMSSPLDDCTEHLLDVDGYANGNGTDLAKPKFKIRNLTRVSDDGVLILKGINVDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSSSVFLDGADICDHDVLSLRRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLTDDEVRKLLIMADLDASFMDKSGAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNRSITVIMVSHSIKQIQRIADIVCLLVDGEIVEVLKPDKLSEAKHPMAQRFLQLSS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1589 319 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 316 IPR003439 GO:0005524
Apr2g1589 319 Pfam ABC transporter 101 244 IPR003439 GO:0005524
Apr2g1589 319 SMART AAA_5 110 293 IPR003593 -
Apr2g1589 319 ProSitePatterns ABC transporters family signature. 216 230 IPR017871 GO:0005524
Apr2g1589 319 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 63 319 - -
Apr2g1589 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 306 IPR027417 -
Apr2g1589 319 CDD ABC_PstB_phosphate_transporter 85 303 IPR005670 GO:0005315|GO:0016020|GO:0035435
Apr2g1589 319 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 63 319 IPR005670 GO:0005315|GO:0016020|GO:0035435
Apr2g1589 319 Gene3D - 83 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1589 Apr-Chr2 21670241 21672005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1589 98 303 Calmodulin-binding Proteins AT2G36910 34.404 2.56e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1589 K02068 - gmx:100791365 408.297