Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1584 ATGGAAGACCTCCTTGGCCTTCTAAGGATTCACATCAAGCGTGGCGTCAACCTCGCCGTTCGAGATGTCAGTACCAGCGATCCTTACGTCGTTGTTAAGATGGGCAAGCAGAGACTCAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAATGAAGACCTTACGCTTTCTGTCACGGATCACCTTCACTCAATCGTATTGACTGTGTATGACCACGACACTTTCACCAAAGATGACAAAATGGGTGATGCAGAATTAGACATCTCACCATACATAGAGGCCTTAAAGATGAATTTAGAAGACCTCCCAACAGGTACTATAATTACAAGAATACAACCAAGCAGGCAAAATTGCCTAGCAGAAGAGAGCTGCATCACTTTTAACGATGGCAAAGTTGTGCAAGATGTTGTCCTTAGATTGCGACACGTGGAATGTGGTGAAGTTGAAATCCAATTGGAATGGATTGATCTTCCTGGCGCTAAGGGTATGTGA 498 0.4398 MEDLLGLLRIHIKRGVNLAVRDVSTSDPYVVVKMGKQRLKTRVIKKDVNPEWNEDLTLSVTDHLHSIVLTVYDHDTFTKDDKMGDAELDISPYIEALKMNLEDLPTGTIITRIQPSRQNCLAEESCITFNDGKVVQDVVLRLRHVECGEVEIQLEWIDLPGAKGM* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1584 165 CDD C2_ArfGAP 5 148 - -
Apr2g1584 165 PRINTS C2 domain signature 22 34 IPR000008 -
Apr2g1584 165 PRINTS C2 domain signature 46 59 IPR000008 -
Apr2g1584 165 PRINTS C2 domain signature 67 75 IPR000008 -
Apr2g1584 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Apr2g1584 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Apr2g1584 165 SMART C2_3c 7 102 IPR000008 -
Apr2g1584 165 Pfam C2 domain 6 92 IPR000008 -
Apr2g1584 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Apr2g1584 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
Apr2g1584 165 Gene3D C2 domain 3 163 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1584 Apr-Chr2 21626142 21627023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1584 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 1.82e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1584 - - gmx:100799469 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1584 2 21626142 21627023 Apr6g0995 6 14594883 14597076 PCT