Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1578 ATGTGGATGGTAGGTTATAATGAAGGAGGCGAATTCAACATGGCTGATTATGCATTCAATGGAAGAAAACTCAGGCCTCTCATGCCAAGGCCAGTTACTTCTCCCAACAACACTTCAACCACAAACACTCCTTGTTTGAGCCGGATTCATCATGGCAACGATTTCTTCTCACAATATCACAATCTGGCATCAGTGGCTGAGCAAGGGAAGAGAGAGTTCAACACCCCACCGGTTGTGGTGAGTTCAAGGTGGAATCCAACCCCGGAACAGCTTAGAGCATTGGAGGAATTGTACAGAAGAGGAACAAGAACACCATCTGCGGAGCAAATCCAGCAAATCACGGCACAGCTTAGGAGGTTTGGAAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGGCAAAAACGCCGCCGTCAAATGGAATCAGCTGCCGAGGGTCATCACACCCGTGACTTTGATAGTACTCTTGAAAAGAAAGATTTGGGCGCAAGTAGGACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTACTCTTGCAGAGGAATCTGTTTCAATACAAAGGGCAGCAAAAGCAGCGGTTGCAGATAGTAGAACAGATGGATGGCTCCAATTCGATGAAGGAGAATTACAACAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTATCTTGTCCTTCTCCTCCTACAGTTACACCCCACCTCATAAACACACCTCCTATTATCTCTACTACTAGCATGGCCACCACAACCACAGTAACAGCAAGAGTAATGGACCCAAAACTCATTAAGAACCATGATCTCAGCTTCTTTATCTCTCCTCACAGAGAAAATGGTATTATACACTTAAGCAGTATCAACACTCAGGATGCTAATTGTGTGGAATCTCAAACCCTTCAGCTTTTCCCAACAAGGAATGGGGATGAAAGCAGCGATAACATTAACCAACAGAAAGAGACAGACACATCAGTTTCAGCAATGAATGCTCCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTGA 1080 0.4407 MWMVGYNEGGEFNMADYAFNGRKLRPLMPRPVTSPNNTSTTNTPCLSRIHHGNDFFSQYHNLASVAEQGKREFNTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHHTRDFDSTLEKKDLGASRTVFEVEQTKNWAPSTNCSTLAEESVSIQRAAKAAVADSRTDGWLQFDEGELQQRRNFMERNATWHMMQLSCPSPPTVTPHLINTPPIISTTSMATTTTVTARVMDPKLIKNHDLSFFISPHRENGIIHLSSINTQDANCVESQTLQLFPTRNGDESSDNINQQKETDTSVSAMNAPSQFFEFLPLKN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1578 359 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Apr2g1578 359 MobiDBLite consensus disorder prediction 322 342 - -
Apr2g1578 359 SMART HOX_1 79 146 IPR001356 GO:0003677
Apr2g1578 359 PANTHER WUSCHEL, PUTATIVE-RELATED 11 359 - -
Apr2g1578 359 CDD homeodomain 83 143 IPR001356 GO:0003677
Apr2g1578 359 MobiDBLite consensus disorder prediction 143 160 - -
Apr2g1578 359 MobiDBLite consensus disorder prediction 140 160 - -
Apr2g1578 359 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Apr2g1578 359 Gene3D - 80 142 - -
Apr2g1578 359 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 359 IPR044555 GO:0003700|GO:0099402
Apr2g1578 359 SUPERFAMILY Homeodomain-like 82 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1578 Apr-Chr2 21591510 21593579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1578 1 359 Wox Gene Family AT3G18010 40.657 2.28e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr2g1578 Homeodomain 9.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1578 - - gmx:100777274 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0998 6 14641484 14644405 Apr2g1578 2 21591510 21593579 ECH
Apr2g1578 2 21591510 21593579 Apr2g1578 2 21591510 21593579 ECH