Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1572 ATGGCTATCTCTTCCAACGACGTGCTTTCTTCTATGTTCCCAGCAGGTATCAGTGTCTTTGCCATTGACGAAGACATCAAAGTCCTTCAAAGCATCGAGCAAATGTGTATGGAGAATAACTATCAAGTCACCGCATGCAACGATTGTACATTTGCTTTGAATCTTGTTAATGACGGAAGATTGAGTTTTGATATCATACTCATTGATGTTCGTATGTCAAATACGGATGGCTACGAATTTCTTCGCCATGCTTTCCAAGACATCGATATTTGTGTTAGTAATGATGTGCAATTTGCAGTGATGTCCGATAATGATGATCCAAATGTGGTATTAGAGTCAATTAATGACGGGGCTTGTGATTTTTGGATTAAACCACTGCGTGAGGAGCAAATTAAGAATATCTGGCGGCATGTTGCAAGGAAAGTTTTGAATGATAAAAAAGAACAAACGAATCTTGGCAGTCTGGAAAATAACAATGACCAAAATAAAAGGAATAACGATTCTGAAGTGAATTCTTATGTGATCGATGCAACAGAAGGAGTCCAAACAAATAGCAATTTAAACGAAGCTGATGAATCAGAGAGTTAG 588 0.3793 MAISSNDVLSSMFPAGISVFAIDEDIKVLQSIEQMCMENNYQVTACNDCTFALNLVNDGRLSFDIILIDVRMSNTDGYEFLRHAFQDIDICVSNDVQFAVMSDNDDPNVVLESINDGACDFWIKPLREEQIKNIWRHVARKVLNDKKEQTNLGSLENNNDQNKRNNDSEVNSYVIDATEGVQTNSNLNEADESES* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1572 195 SUPERFAMILY CheY-like 16 167 IPR011006 -
Apr2g1572 195 Gene3D - 17 163 - -
Apr2g1572 195 Pfam Response regulator receiver domain 19 133 IPR001789 GO:0000160
Apr2g1572 195 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 12 169 - -
Apr2g1572 195 ProSiteProfiles Response regulatory domain profile. 18 139 IPR001789 GO:0000160
Apr2g1572 195 SMART REC_2 17 135 IPR001789 GO:0000160
Apr2g1572 195 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 169 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1572 Apr-Chr2 21544004 21544731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1572 10 180 Response Regulator Gene Family AT4G16110 35.227 4.87e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr2g1572 Response_reg 1.9e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1572 - K14491 aprc:113855824 389.037