Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1568 ATGGCCAACTCTTCCAATGGAGACGTGACTTCTTCTACGTTACAAGCAGGTCTCAGGATCCTTGCCATTGACCATGACATCGATGTCCTTGAAAGCATCAAGCAAGTGTGCATTGATTTCATCACATGCTCCGACAGTTCACTTGCTTTGAATCTTGTTCATGAAAGAAAAGGGTGTTTTGATATCATACTCATTGATGTTCATATGCCAAATATGGATAGCTACGAATTTCTTCGCCATGTTTGCCAAGATATCGACGTTCCTGTCATTATGATGTCAGATGATAATGATGCAAGTGCGAAATTAAAGTCAATTAATGACGGGGCTTGTGATTTTTGGACTAAACCACTGCGTCCGGAGCAAATTAGGGATATCTGGTTGCATGTTGCAAAGAAAGTTTTGAATGATAAAAAAAAACAAGATAATCTTGGCAGTTTGGATAACAATAATGGCCAAAATCAGAGGAATGGTGATTCGGAAGTGAATTCTTCTGTTATCAATGCAACGGAAGGAGTCCAAAGAAATAGCAATTCAAACGAAGCTGATGAATCGGAAAATAATTATCAACCTCCACGAAGGAGGCCCCGTCTAGTGTGGACATCAACATTGCATAATCATTTTATTGATGTTGTGAACCAACTTGGGGCTGACAAAGCTGTCCCAAAGAGAATTCTTGAATTGATGAATATCCCTAATCTGACAAGAGAGAATGTTGCTAGTCATTTGCAGAAATATAGACTTCATTTGAAAAGGAAAAATGAAGTTACACAGCAACAAAACGAGATGTCAGTGCCAAACACTGTTCCTAGTTCTACAGAAACCAATGCTGAAGTCCCACGAGAGACGCCAATGCCAAACAGCGTTCGTAGTTCTACAGAAACCAATGCTGATGACTTTCAAGCTTTGGCTGCTGCTGTTAATCTTCCCTATGAAACACTGCTAAACCTTCCTCCCAACATGATGCCAGTAGAGGCCCAGAATGCACTCAGAAGATGGTCCAACCAGTCCAATATAGCATATGCTCATGCTCCTCTTAACATTGCCAGGCCTTTAGACCATGATTCAACAACTTGGCCTCCATCTAATACAATTGATAATTTAGTAGGAAACTTTGACACATTATTGCAAGATCAAAGGCAACGGAATCAACTATCACTCTTACATCATCGTGTCCATATTCAACCCCCTCCCATGACGGTTTCTAGAAGCCCTGCTATCCATAATTGCAACTTTGAACGAAACACTCTAATACTATCACATCAACCTCAACCTAGCAGTTCACTTGGTGGTGTTCAAGGTGCTGAAAACAGCATTTTCTATGATTGCGTTGTTACTACTGATACCCTACCTTCCATTTCTCATCGTCGTCGAAATGCAATTTTGACAAGGGGTGCTATGAGATGTTTTCCTACTATTCGTTCACCAGGTTCCTTGTGA 1437 0.4071 MANSSNGDVTSSTLQAGLRILAIDHDIDVLESIKQVCIDFITCSDSSLALNLVHERKGCFDIILIDVHMPNMDSYEFLRHVCQDIDVPVIMMSDDNDASAKLKSINDGACDFWTKPLRPEQIRDIWLHVAKKVLNDKKKQDNLGSLDNNNGQNQRNGDSEVNSSVINATEGVQRNSNSNEADESENNYQPPRRRPRLVWTSTLHNHFIDVVNQLGADKAVPKRILELMNIPNLTRENVASHLQKYRLHLKRKNEVTQQQNEMSVPNTVPSSTETNAEVPRETPMPNSVRSSTETNADDFQALAAAVNLPYETLLNLPPNMMPVEAQNALRRWSNQSNIAYAHAPLNIARPLDHDSTTWPPSNTIDNLVGNFDTLLQDQRQRNQLSLLHHRVHIQPPPMTVSRSPAIHNCNFERNTLILSHQPQPSSSLGGVQGAENSIFYDCVVTTDTLPSISHRRRNAILTRGAMRCFPTIRSPGSL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1568 478 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 9 385 - -
Apr2g1568 478 MobiDBLite consensus disorder prediction 254 293 - -
Apr2g1568 478 MobiDBLite consensus disorder prediction 140 193 - -
Apr2g1568 478 CDD REC_typeB_ARR-like 20 130 - -
Apr2g1568 478 MobiDBLite consensus disorder prediction 144 185 - -
Apr2g1568 478 MobiDBLite consensus disorder prediction 256 293 - -
Apr2g1568 478 SMART REC_2 18 126 IPR001789 GO:0000160
Apr2g1568 478 SUPERFAMILY Homeodomain-like 192 251 IPR009057 -
Apr2g1568 478 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 248 IPR006447 GO:0003677
Apr2g1568 478 SUPERFAMILY CheY-like 17 133 IPR011006 -
Apr2g1568 478 Gene3D - 4 143 - -
Apr2g1568 478 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 385 IPR045279 GO:0009736
Apr2g1568 478 Pfam Myb-like DNA-binding domain 198 246 IPR001005 -
Apr2g1568 478 ProSiteProfiles Response regulatory domain profile. 19 130 IPR001789 GO:0000160
Apr2g1568 478 Gene3D - 191 252 - -
Apr2g1568 478 Pfam Response regulator receiver domain 21 124 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1568 Apr-Chr2 21522330 21524515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1568 48 316 Response Regulator Gene Family AT3G16857 37.113 3.66e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr2g1568 Response_reg 1.3e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1568 - K14491 aprc:113871558 285.034