Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1564 ATGGGTGGTGGAGGAACACTCGTGGAAGGGATTCGACGCTTGTTTCAACGACGCGCTTCTGCTTCTGCTGAAGACCACAGCAATGCCAATAATAGCCGCGTTTACGTGAGAGATTTGCGCGCGCAATTAGCCTCGGTTCCCGACCAGGATCGCCAAACAGACCTTACTGTTCAACAAGATTTTGATTTTGATTTTGATTTCTCTTCCTTGAAGCCCATCAAAGTCCCCACGCAAGCCCTCTTCAGACCTTCTTTCATGGATTCTCACAAAAAGGGTGCACCAGAAACAGAGTTTTTTACAGAGTATGGGGAGGCAAGTCAATACCAGATCCAAGAAGTTGTTGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCCATTGACACTCATACTGGTGAAAAGGTTGCAATCAAGAAAATTAATGATGTTTTTGAACATGTATCGGATGCCACTCGGATCCTTAGAGAAATTAAACTCTTGCGGTTGCTCAGACATCCTGATATTGTAGAAATTAAGCATATTATGCTTCCTCCATCTCGGAGAGAGTTCAGGGATATCTATGTCGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCGGAGCACCACCAATTTTTCTTGTACCAACTTCTCCGGGGCTTGAAATATATACATACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAATTGAAGATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCTCCATCGGCTATATTCTGGACTGATTATGTTGCAACTCGGTGGTACCGTGCACCTGAACTATGCGGTTCTTTTTTCTCAAAATATACCCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTATTTCCTGGGAAAAATGTTGTGCACCAATTGGACCTCATGACTGATTTGCTTGGCACTCCTCCTCCTGAGTCAATTTCGAGGATTCGAAACGAGAAAGCTAGAAGGTATCTTAATAACATGCGAAAAAAGCAACCAGTTCCATTGTCCCAAAAATTTCCAAATGCAGATCCGTTGGCTCTTCATCTGCTGGAGCGCCTACTTGCATTTGATCCTAAAGACCGTCCAACAGCTGAAGAGGCGTTAGCTGATCCTTACTTCCATGGTTTGGCGAACGTGGACCGGGAACCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAGGATGATGTTAGAGAGTTGATTTATCAAGAGATTTTGGAGTATCATCCTCAGATGCTCCAAGAATATCTTCGTGGTGGAGAGCAAACTAACTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAAGAGCATTATGGCAAAGGTGAACGAAGTACTCCGTTGCAGAGACAGCATGCTTCCTTACCTAGAGAACGAGTTTGTGCTCCCAAGGATGAAAATAATCAAAATAACGATTTTGAAAGGCCGACTGGATCAAATCTTCAAAGTCCTCCAGGGTCTGAAGTAACAGATGCGCAAAATGGAACCTCAAAACCAAACTGTAGTGCACGTAGCTTGTTGAAGAGTGCCAGTATCAGTGCCTCCAAGTGTATAGAAGTGAAACGAAATAAAGATCCAGAGGAGTCAATTGCGGAGGTGAATGAGGAGACAGTGGATGAATTAACAGATGAGGTTGCTGCTCTGAATGCTTTGATGTAG 1779 0.4289 MGGGGTLVEGIRRLFQRRASASAEDHSNANNSRVYVRDLRAQLASVPDQDRQTDLTVQQDFDFDFDFSSLKPIKVPTQALFRPSFMDSHKKGAPETEFFTEYGEASQYQIQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESISRIRNEKARRYLNNMRKKQPVPLSQKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYQEILEYHPQMLQEYLRGGEQTNFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDENNQNNDFERPTGSNLQSPPGSEVTDAQNGTSKPNCSARSLLKSASISASKCIEVKRNKDPEESIAEVNEETVDELTDEVAALNALM* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1564 592 Gene3D Phosphorylase Kinase; domain 1 124 445 - -
Apr2g1564 592 Gene3D Transferase(Phosphotransferase) domain 1 194 422 - -
Apr2g1564 592 Pfam Protein kinase domain 108 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1564 592 MobiDBLite consensus disorder prediction 497 511 - -
Apr2g1564 592 Coils Coil 571 592 - -
Apr2g1564 592 ProSitePatterns Protein kinases ATP-binding region signature. 114 138 IPR017441 GO:0005524
Apr2g1564 592 ProSitePatterns MAP kinase signature. 143 246 IPR003527 GO:0004707|GO:0005524|GO:0006468
Apr2g1564 592 SUPERFAMILY Protein kinase-like (PK-like) 104 404 IPR011009 -
Apr2g1564 592 MobiDBLite consensus disorder prediction 512 545 - -
Apr2g1564 592 ProSiteProfiles Protein kinase domain profile. 108 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1564 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 69 532 - -
Apr2g1564 592 SMART serkin_6 108 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1564 592 MobiDBLite consensus disorder prediction 478 545 - -
Apr2g1564 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 69 532 - -
Apr2g1564 592 CDD STKc_TDY_MAPK 107 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1564 Apr-Chr2 21489096 21494633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1564 93 590 MAP Kinase Gene Family AT3G18040 84.387 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Apr2g1564 Pkinase 4.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1564 - - gmx:100780831 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1003 6 14721243 14726691 Apr2g1564 2 21489096 21494633 ECH
Apr2g1564 2 21489096 21494633 Apr2g1564 2 21489096 21494633 ECH