Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1532 ATGTTTATGACCCATGACCCGGGGCTTGCTGAGGATCCGCCCGAGGTGCAGGAGTCTCTACCACCATTCATGGATCCACCACCCCACTCCACCATCTCACTAAACCACCCTGATTCAGTAGATTCCTCTCCCCGTTATCGCATGATCGAAACCTGGCACGATGACCCACTCGCACACGTGCCAGGTGCAAAGCTCCGCCTCATGTGCAGCTACGGCGGCCACATCATGCCACGCCCCCACGACAAGTCCCTCACCTATGTCGGCGGCGACACCCGCATCGTCGCCGTTGACCGCCACTCTTCCCTCAAAGACCTCTCTTCTCGCCTATCTCGCACCCTCCTCCATGGCAGAACCTTCACTCTCAAGTACCTCCTTCCCAACGAAGACCTCGACAACCTCGTCACTGTCGCCACCGACGAAGACCTCGACAACATGATCGAAGAACACGACCGTTTGACCGCGAAACCTTCTTCCCCTTTGCGTCTTAGGTTGTTCTTGTTCTTCAACAAACCTGAAACTGCTGTTTCCATGAGTTCACTGTCTCTCCTCGATGATGCCAACTCGGACACGTGGTTCGTGGACGCTCTGAACAACTCGGGGATTTTATCACGCGTTGTTTCCGATTCTGCGGTTGCTTCGGATTGCCTGGTGAACCTTGATGCTTGTGATTCGAGCAACAACTTGGAGGTTGATGGATCTTCAGTGGCTAATCTGCCTCCGATACGGGTTCGTGTTGTTGATGATAATGGTGGCGGGGTTGAGAGGGTTGTGATGGAGGAGAGTTTTGGTATTGGTGCAAAGCAAGATGATGGGTATGGAGTTTCTTCTTCTGGTGGTCTGAGTGTGGTTAATAATAGTAACAGCAACAGCAACAGTAACAGTAACAGTAACAGTAACAGTAACATTGGTGATCATGATAATGTGAATGGAGTTGTTTCTGTCTCTGAGGATGAAAGATCAGAATCAGATCATCATGGTCATGGGGGACATAGGAAGCCACCTTTGCCATTGCAACTTGTGCAACCAAGGACTAGTTGTGCTTTTAGTTTGCATTCTCCAGATTCAGTTGCAAGTGATAGCAGTATTTCATCTACTAATTCTTTCTCAAAGATTGTTTACTATCAAGACCAAGTCCAAGCAGCACATGTGGACAACAAAGGTCCAATAACTTTGGCAAATATCAAGAGTGAAATAAGATCTAATCAACACCATGGACTACAAGTTCATGATCCGGGTACACCTCAAGTGCCAATTTCATCCTACTACCCACTTTATGCCCCAACATCACAACAATACCCAGTTTATGTGATGCCTGTTGGACCTACACAACCGTACAACATGACTTTGCAATCCAATATAACTGACTCAAATGTGGTAGCTTCAGTTAGGCCACTAATACCACAAAGTGCATACAAAGATGGCATTCCACCTATTTATCCCACTAAATCTTCAGCCACCCCAACTATTCCTGATGTGGCTGCAAGTGTTTATAAAGCCCCTTTGGCATCAAATCCTACATTTGTTCAAGTACCTATAAATCAATTTCAGCAACAGAATGTGGGTTTGCCTCAACAACATATCCATCACCCACCACCACAACCTATTGTAGCTCCTACTTCCACCACTAATTATGGTTATGAATATGGTGGACCTACGCAAGATCAGGTATACTATACACAACACCAAGTTACTGCTTCACAGCAACTTCCTCAGTACCAGTCCATGACCCCAGCAATATCAGATGTTTCAACACAGTTTTCTGTAGACAACGTTCAGCAGCCAAGCAGAACTTCACAACCAGTATGA 1806 0.469 MFMTHDPGLAEDPPEVQESLPPFMDPPPHSTISLNHPDSVDSSPRYRMIETWHDDPLAHVPGAKLRLMCSYGGHIMPRPHDKSLTYVGGDTRIVAVDRHSSLKDLSSRLSRTLLHGRTFTLKYLLPNEDLDNLVTVATDEDLDNMIEEHDRLTAKPSSPLRLRLFLFFNKPETAVSMSSLSLLDDANSDTWFVDALNNSGILSRVVSDSAVASDCLVNLDACDSSNNLEVDGSSVANLPPIRVRVVDDNGGGVERVVMEESFGIGAKQDDGYGVSSSGGLSVVNNSNSNSNSNSNSNSNSNIGDHDNVNGVVSVSEDERSESDHHGHGGHRKPPLPLQLVQPRTSCAFSLHSPDSVASDSSISSTNSFSKIVYYQDQVQAAHVDNKGPITLANIKSEIRSNQHHGLQVHDPGTPQVPISSYYPLYAPTSQQYPVYVMPVGPTQPYNMTLQSNITDSNVVASVRPLIPQSAYKDGIPPIYPTKSSATPTIPDVAASVYKAPLASNPTFVQVPINQFQQQNVGLPQQHIHHPPPQPIVAPTSTTNYGYEYGGPTQDQVYYTQHQVTASQQLPQYQSMTPAISDVSTQFSVDNVQQPSRTSQPV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1532 601 MobiDBLite consensus disorder prediction 316 330 - -
Apr2g1532 601 SMART PB1_new 79 167 IPR000270 GO:0005515
Apr2g1532 601 MobiDBLite consensus disorder prediction 275 308 - -
Apr2g1532 601 Gene3D - 85 168 - -
Apr2g1532 601 SUPERFAMILY CAD & PB1 domains 80 178 - -
Apr2g1532 601 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g1532 601 PANTHER OS05G0427100 PROTEIN-RELATED 232 593 - -
Apr2g1532 601 PANTHER OS05G0427100 PROTEIN-RELATED 24 224 - -
Apr2g1532 601 ProSiteProfiles PB1 domain profile. 64 167 IPR000270 GO:0005515
Apr2g1532 601 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 24 224 - -
Apr2g1532 601 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 232 593 - -
Apr2g1532 601 MobiDBLite consensus disorder prediction 275 337 - -
Apr2g1532 601 CDD PB1_UP2 68 167 - -
Apr2g1532 601 Pfam PB1 domain 80 167 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1532 Apr-Chr2 21219262 21226392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1532 64 198 MAP Kinase Kinase Kinase AT5G57610 44.444 3.76e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1532 - - aprc:113855816 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1030 6 15037613 15040176 Apr2g1532 2 21219262 21226392 ECH
Apr2g1532 2 21219262 21226392 Apr2g1532 2 21219262 21226392 ECH