Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1519 ATGGTGGGGCAGAATCCTTTACCAAAGGATAGGAATAGAGATTGGATTAGAGCTCTTATGAATAGCAGCTTTGGTTATTGTGATGATCACCATGACCTTCGATCTAACGAGAAAAATGTCTTCTGCATAGATTGTGCTGTTAGACTGTGTAGGCACTGTAAAGAAGCTCATTCCCTCCATAGAAGGTTTCAGATTTACAAATATTCCTATCAGGATGTCTTCCGCCATTCCGAGCTGCAGAAGTATTTTGACTGCTCAAAAATTCAGACTTACATATCCAACAATGAAAGGATTGTGCATCTCAAACCTAGGCCTTCAACTACTAAATCTAAATCTGCTGATTTAAGTCCTGACTCAAAATCCAAAGAAACCAGCATAACAACAAAACCAAAGTCAGGTGGCACGTGTGAAGAATGTGGAAAACACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCTTCCAGTGGAGCCCCAAAGCCAAAGTGGTAGAGGCGTCATTACAACAAAACCTGAAGCTATTGACTATACAATAAATGACAACCATAATTCAGAACCAGAATCATCTATCTCTGAAGCTGAGCCATATGGGTGGGTTGAAGTCGTGAATTTCAGAAAGCGACCAAGGAAAAGCATCCCCCAGAGGCCTGTCTTTGTTTTCTTATCTTAA 687 0.409 MVGQNPLPKDRNRDWIRALMNSSFGYCDDHHDLRSNEKNVFCIDCAVRLCRHCKEAHSLHRRFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSTTKSKSADLSPDSKSKETSITTKPKSGGTCEECGKHLQDERNRFCSITCKISVLPVEPQSQSGRGVITTKPEAIDYTINDNHNSEPESSISEAEPYGWVEVVNFRKRPRKSIPQRPVFVFLS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1519 228 MobiDBLite consensus disorder prediction 105 132 - -
Apr2g1519 228 Pfam PLATZ transcription factor 67 157 IPR006734 -
Apr2g1519 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 221 - -
Apr2g1519 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 221 - -
Apr2g1519 228 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Apr2g1519 228 MobiDBLite consensus disorder prediction 100 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1519 Apr-Chr2 21097854 21099826 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr2g1519 PLATZ 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1519 - - gmx:100815813 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1519 2 21097854 21099826 Apr2g1519 2 21097854 21099826 ECH