Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1514 ATGTTAGGGAATTCTTCTTGTATTCCTCCAACCAAACACGATGTGTTCCTCAGCTTTAGAGGGGAAGACACAAGAAACGGTTTTGCTGATCATCTTTATGCAGTTTTGTGCAGCAAAAAGATTAAGACTTTCATAGATGACAGACTTTGTAGAGGAAATGAGATTTCACTATCTATACAAGAAGCAATAGAAGAATCAAATATTTATGTCATCATTTTCTCCCAACACTATGTTTCTTCCACGTGGTGTTTGGAGGAACTCACAAAGATACTTGAATGCAAAAGTAGATATGGAAGGGCGGTGATACCAGTTTTCTACAAGGTGGATCCATCACTTGTTAGGGATCAAAGAGGAAGTTATGGAGATGCATTTGCCAAGCATGAGCTGCTATTTAAGGACAAAATTATGGGGTGGAAGGTTGCTCTAACTCAAGCTGCTGGATTATCTGGTTGGGGTTCAAAAATAGTTGGGTTGAAGACTAATGCATTTGTTTCTTTACTATGTACCAGACCTGAATACCTACTTGTCCAAGAAATTGTTCAAGATGTTTTGAGAATATTGAAAAACCGTTCTCCCATATTAGATTATCAAGGATTGGTTGGAATTTACAAGCATATGGCAGAAATCCAGTCCTTGTTGCATGTTGAGTCAGAAGCTGTTCGGATCATAGGAATGTGGGGCATTGGAGGAATTGGTAAGACAACAATTGCACGTGCAATATATCATAATCTGGCAAACCAATTCACTTCCTGCAGCTTTGTTGTAAATGTTCATGAAGAGGTAGAAAGATATGGAATGCACCATACACAGAGCAAATATTTATCAGAGCTTGTAGGAGAAGAAAACACATCCTCTGGTTTAAGTTTTTCAGATGAAAGGCTTAAACGGGAAAAGGTTCTCCTTATTCTTGATAACATCAACAATTCATATGAAATTGGAGATTTAATTGGAGGGCGTGGTTGCTTTGGTCCGGGAAGTAGAATCATTGTGACTAGTAGAGACATGCAAGTGCTAAAGAATGCTGAAGTAGATGAACTATATGAGGTCAAGGAGATGAGTTTTCAAGATTCTCTACAACTTTTTAGTTTGAATGCCTTTAAGCAAAACTATCCAATAGAAAACTATATGAACTTGTCTGAAAAGGTATTGAATTATGCTAAAGGGATTCCATTAGGTCTCAAAGTTTTGGGCTTATTGCTTTATGGTAGAACAAAGGAAGAATGGGAAAGTGTGTTAGAAAAACTCGAAAAGCTTCACGATCTTGACACTTTTGATGTGTTGAAATTAAGTTATGATGAACTTGATAATGAACAGAAGGATATATTTCTTAACATAGCTTGTTTCTACAGAGGACATGATATGAATACTGTAAAACAAGCACTAGATAGTTGTGGCTTCTCTTCTGTCACTGGAATGAGTGATCTCATTGATAGGGGCTTTATATCTATTTTGAAAGGTGAAATTGTGATGCATGATCTGATACAGGAAATGGGTCAAGAAATAGTTCGTCAACAATGTGCCAGTGAACCTGGAAAAAGAAGTAGGTTATGGAAGAATGAAGACATTTATCATGTTTTAAGAGAAAACAAGGGGACAGATGCTGTCAAATATATATTCCTTGACACATGCCAAATCAAAGAAGTTCAATTGCATTCTGGAACTTTCAAAATGATGCTTAATCTGAGACTTCTCCAGTTCTGTAACTCTAAATCAACTAAAGACTCGAAAGTGCACGTTCCTGAATTTCTTGTCAGTCTGCCGGATGATTTACGGTTTCTTTGTTGGGATGGCTTCTCTCAAAGATCATTACCACTGGACTTTTGCCCAGCAAATCTTGTTAAACTTGATATGCGTTACAGTAAACTTGAACAACTTTGGGAGAGAGATCAGAACTTGATTAAAATACCAGATCTTTCCCAGTCTCCAAATATTGAAGAAATAATTCTTAGTCACTGTGTGAGCTTGGTTCAAGTGTACTCCTCAAGTTTCCTCAGTAAGCTCAACTGTTTATGGTTAAATGGTTGTGATGGGCTTAGGAGTTTAAATCTTCCAAGCAATATTCTTTCACAATCTTCTGGACTAATTGTTCTCTATGATTGTTGCAACCTTGAGATGTTTTCAATAGGTTATATCACTATGGGGACTTTTTTATACAGTTGTCCTCGTAGTAGATCAATAGAGAGTATATTCAGAAACAGTTTGCCTGGGCAAACAATTTGCTGTTCTATAGATACAAAAACTAGGTCCTTATTTGAGAAATTCTCAGATACTTTTGACCCCATAGATAGTGGTGCTGACTTCTATGAAGAACCAGAGGATAATATACACTTACTAAACTTAAAAATGTTGAGAGAAGGTTCACCATCATTATTTCCAAGTCTAAATGAGCTTTGTTGGTTAGACCTTTCTTACTGTGAATCCCTCACAAGAACAGCAATTCAAGAACTACCTTCATCTTTGCACAATTTGGTCGCGCTTGAAGAGTTGAGCTTGCGCCGGTGCCAAAGGCTTGTGTTTATTCCACCTTCAATTGGAAGTGTCAGCAAACTCTGCATGTTAGACCTTGCTTACTGTGAATCTCTTGAAACTCTTCCCAGCAGCATTTTCAAATTGAAGTTGACAAAACTTGATTTGAACGGTTGCTCAATGCTAAGAACTTTCCCTGAGATCTTAGACCCTGCAGAAAGTTTTGCTCTCATTAGCCTAACAAAAACAGCAATTAAAGAACTACCTTCATCATTGGAAAAGTTGGTTGGGCTTCAAACCTTGCAGCTGAACTTGTGCAAAGATCTTGAGTTACTTCCAAACAGCATTAGTAAGGCAACACTTCTCTCCAAGCTTGATCTTTCAGGATGTGACAAATTATCAGAAATACCAAGTAACATTGGCCACTTGTCATCATTAAGAGAATTGTCACTGCGTGAAAGTGGTATTGTGAACCTTCCTGAGAGCATTGTTCATCTTTCAAGCTTGAAATCACTTGATTTGAGTGATTGCAAAAAGCTTGAATGCATACCACAGCTTCCACCATTTCTGAAATACATGGCTGTATTTGATTGCCCATCCATTAGGAGAGTGTCAAGTTCACATTTAAATTTCTCATCAGATTCCAAAGAGGGTATCTTCAAATTTCATTTAACCAATAGTCAAGAACTGGATCCGAGTGCTCAAAGCAACCTTGCAGCTGATGCATGGCTTAGGATCCTCCAAGATGCATACAAGTCTGTTTTTTATTGCTTTCCAGGGAGTGCAGTTCCTCACTGGTTCCCTTACCGCTGCAAGGGACATTCAGTAACTATGAAAATAGATTCTCTTAGTTGGTGCAGTGATGATAAGTTCATTGGCTTTGCTCTTTGTGTCGTTTTGGGACTTGAAGGTATAAATGATGAAGAATGTAAATATAGTGTCTTTAGCTACAGATTCACATTTGAATCTGATGATGGCATACACATTATTCCTAGCCATGATCAGCTAAGATACTATTTTAATTGGAAGGGTCAACAAAGATTTGTTGTTAATGATCACACGTTCATGTGGAAATATTACTTGGATTCTTCAAGCATCAGCCAATTGCTATCTCGTGCCCACAACTTCACTTTTGAAATCTGCAAATATGATGTTGGTCACTTTTGGCTAAATAATAGGCCAACTTTCAAGCTTCCTAATACTATTACTTATGTCTTTTGTATATTGCAGTAA 3699 0.3747 MLGNSSCIPPTKHDVFLSFRGEDTRNGFADHLYAVLCSKKIKTFIDDRLCRGNEISLSIQEAIEESNIYVIIFSQHYVSSTWCLEELTKILECKSRYGRAVIPVFYKVDPSLVRDQRGSYGDAFAKHELLFKDKIMGWKVALTQAAGLSGWGSKIVGLKTNAFVSLLCTRPEYLLVQEIVQDVLRILKNRSPILDYQGLVGIYKHMAEIQSLLHVESEAVRIIGMWGIGGIGKTTIARAIYHNLANQFTSCSFVVNVHEEVERYGMHHTQSKYLSELVGEENTSSGLSFSDERLKREKVLLILDNINNSYEIGDLIGGRGCFGPGSRIIVTSRDMQVLKNAEVDELYEVKEMSFQDSLQLFSLNAFKQNYPIENYMNLSEKVLNYAKGIPLGLKVLGLLLYGRTKEEWESVLEKLEKLHDLDTFDVLKLSYDELDNEQKDIFLNIACFYRGHDMNTVKQALDSCGFSSVTGMSDLIDRGFISILKGEIVMHDLIQEMGQEIVRQQCASEPGKRSRLWKNEDIYHVLRENKGTDAVKYIFLDTCQIKEVQLHSGTFKMMLNLRLLQFCNSKSTKDSKVHVPEFLVSLPDDLRFLCWDGFSQRSLPLDFCPANLVKLDMRYSKLEQLWERDQNLIKIPDLSQSPNIEEIILSHCVSLVQVYSSSFLSKLNCLWLNGCDGLRSLNLPSNILSQSSGLIVLYDCCNLEMFSIGYITMGTFLYSCPRSRSIESIFRNSLPGQTICCSIDTKTRSLFEKFSDTFDPIDSGADFYEEPEDNIHLLNLKMLREGSPSLFPSLNELCWLDLSYCESLTRTAIQELPSSLHNLVALEELSLRRCQRLVFIPPSIGSVSKLCMLDLAYCESLETLPSSIFKLKLTKLDLNGCSMLRTFPEILDPAESFALISLTKTAIKELPSSLEKLVGLQTLQLNLCKDLELLPNSISKATLLSKLDLSGCDKLSEIPSNIGHLSSLRELSLRESGIVNLPESIVHLSSLKSLDLSDCKKLECIPQLPPFLKYMAVFDCPSIRRVSSSHLNFSSDSKEGIFKFHLTNSQELDPSAQSNLAADAWLRILQDAYKSVFYCFPGSAVPHWFPYRCKGHSVTMKIDSLSWCSDDKFIGFALCVVLGLEGINDEECKYSVFSYRFTFESDDGIHIIPSHDQLRYYFNWKGQQRFVVNDHTFMWKYYLDSSSISQLLSRAHNFTFEICKYDVGHFWLNNRPTFKLPNTITYVFCILQ* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1514 1232 Gene3D Ribonuclease Inhibitor 767 900 IPR032675 -
Apr2g1514 1232 Gene3D - 352 435 IPR042197 -
Apr2g1514 1232 SMART till_3 12 148 IPR000157 GO:0007165
Apr2g1514 1232 Pfam NB-ARC domain 205 417 IPR002182 GO:0043531
Apr2g1514 1232 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 708 IPR044974 GO:0006952
Apr2g1514 1232 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 822 1154 IPR044974 GO:0006952
Apr2g1514 1232 SUPERFAMILY "Winged helix" DNA-binding domain 424 526 IPR036390 -
Apr2g1514 1232 Pfam C-JID domain 1080 1181 IPR045344 -
Apr2g1514 1232 Pfam TIR domain 12 201 IPR000157 GO:0007165
Apr2g1514 1232 ProSiteProfiles TIR domain profile. 11 187 IPR000157 GO:0007165
Apr2g1514 1232 SUPERFAMILY RNI-like 786 1043 - -
Apr2g1514 1232 Gene3D - 10 189 IPR035897 -
Apr2g1514 1232 Pfam Leucine Rich Repeat 611 630 IPR011713 -
Apr2g1514 1232 SUPERFAMILY L domain-like 489 711 - -
Apr2g1514 1232 PRINTS Disease resistance protein signature 222 237 - -
Apr2g1514 1232 PRINTS Disease resistance protein signature 293 307 - -
Apr2g1514 1232 PRINTS Disease resistance protein signature 386 400 - -
Apr2g1514 1232 PRINTS Disease resistance protein signature 986 1002 - -
Apr2g1514 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Apr2g1514 1232 Gene3D Ribonuclease Inhibitor 901 1060 IPR032675 -
Apr2g1514 1232 Gene3D - 190 347 IPR027417 -
Apr2g1514 1232 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 822 1154 - -
Apr2g1514 1232 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 708 - -
Apr2g1514 1232 Gene3D Ribonuclease Inhibitor 486 742 IPR032675 -
Apr2g1514 1232 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1514 Apr-Chr2 21068002 21072890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1514 13 829 WRKY Transcription Factor Family AT4G12020 30.867 2.64e-90 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1514 - - adu:107481402 1065.06