Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1511 ATGTCTGTTAAGGGCCGGTCCAGTGGCTGGTGGATTCCATTGATGCTACTTTGTGTTATTTTAATACTCTCTTCATCCTGTGTTGCTGGTTTTTCTAGGAATGCTCCATTGATATCTTCTGCAGTTTATAATGAAGTGAATGGTCTTCTAAAGTGGAAAGCCAGCTTTGATAAGCATAGCCAAGCTCTCTTGTCTTCTTGGAAAGGTAATGATCCTTGCAAATGGGATGGAATTCTTTGTGATAAATCCAAGTCCCTCTCTTCAGTAAATCTTGCAAATTATGGACTCCAAGGTACACTCCACACTCTCAACTTCTCCTTATTCTCCAACTTACACACTCTTAATATATACAACAACTCCTTTGGTGGAACCATTCCTCCCCAAATTGGTAACATGTCTAAAGTCAACCGCTTGAATCTTTCTTTAAATTCTTTTGATGGTCCTATTCCTAAAGAAATGTGGACATTGAGGAGTTTACGTGGCCTTGATATTTCCATGTGTCATCTAAATGGAGCCATCCCAAATTCTATAGCAAATTTGGCCAATTTATCAATTCTAAATTTAGCAAGCAACAATCTTTTTGGTTACATTCCTCTGGAGATTGGGAAATTACAGAAACTGGAATATCTAGATATTGGATATAACAGCCTTTCTGGTTCCATTCCTCAGGAAATTGGAATGTTAACAAACCTTAGGTATATTGATTTGTCACGGAACACCATCTCAGGTACTATCCCTTCAACAATTGGTAACATGAGCAATTTAAAAGAACTTTACCTTGAAAGAAATACCCTCTTTGGGCCAATCCCACCCTCCATGTGGAACCTAACTAATTTGTCCTCGTTCTTTCTTAATGACAACAAACTTTTCGGATCAATCCCTGCTTTCATAGAAAATTTGGTCAATTTGGTTTTCCTTGAATTTTATAACAACAACTTTTATGGACCAATTCCTTCCACTATTGGAAACTTAACAAAGCTCACTGGATTAGGCTTCGGCTTAAATAAATTTTCTGGGTCAATTCCTGCTTCTATAGGAAATTTGATCAATTTGGATACCCTCACTCTCCAAGGAAACAATCTCTCTGGTTCTATTCCTTCCACAATGGGAAATCTGATTTTGCTCACCAGGCTTGGATTGTCCTCCAACAAACTAAATGGAAGCATTCCAAAGGAAATGAATAACATAACCAATTTGTATAACGTACAATTATCTGACAATGATTTCATTGGCCATTTGCCACCTCAAATATGCATTGGTGGGTCACTAGCATTCTTGGCTGCCGATAACAACCATTTAACAGGTCCAACACCGACAAGTTTGAAGAATTGTTCTACTCTAACTAGACTCAGACTTGAAGAAAACCAAATAAAGGGAAATATAACAGAAGATTTTGGGATATATCCAAATTTGAAATATATCGATCTGAGTGACAATCAATATTATGGCCACATTTCACCAAACTGGGGAAAGTGCCTTAATCTTGATAGCTTTAAGATATCAAACAACAATATTTCCGGTGGTATACCACCTCAACTTGTTGAGGCAACCAATCTAGGCAGGCTTTACCTTTTTTCAAACAACTTGAGTGGGACTCTCCCCAAAGAACTAGGGAATTTAAAATCATTAGTTGAGATTAAGATCAGCAACAATAATTTTTGTGGAAGCATTCCCACAGAAATAGGATTGATAATGAATCTTCAACACTTGGATTTGGCAGGAAATGAGTTTAGTGGCACAATACCAAAACAAGTTGTGAGGTTACCAAACTTATTGGAATTGAATTTGAGCAACAATAAAATTGAGGGGAATATTCCCTCGGAGTTTAGCCAATTGCAGCCTCTTGAATCTCTTGATCTCAGTAGCAATCTTTTGAGTGGAACTATACCAACTATAATTGGTGAATTGCGGCGCTTACAATTGTTGAACCTCTCGCACAATCATCTTTCTGGCATTATTCCTTCTAGTTTTGATGAGATGTCAAGCTTGATTTCCGTTAACATTGCTTACAACCAATTAGAAGGGCCACTTCCCAAAAATCAAGCCTTTCTTAAGTCATCCACAGATTCACTGAGAAATAATAAAGGCTTGTGTGGGAATGTTACTGGTTTGATGCATTGCCCGACCAATCACAAATCAAAGATTCACAAAGTGATGCTACTGGTGCTATGTCTTATCTTACCCACTTCTATATTTTGTGGGGTGGGAATTTCAATATATATTCTTTGTGGAAAATGGAGAGAAAAACAAACTCATGTTGAACAACAAACAGGAGAATTATTTTCAATATGGAGTTATGATGGAAAAATAACTTTTGAAAATATCATTGAAGCTACAGAGAATTTTGATGATAAGTATCTCATTGCGGTGGGAGGGCAAGGATATGTTTACAAGGTTGAGTTGGCTGTTGGTCTCGTTGTTGCAGTGAAGAAACTTAACTCTGTAACAAATGAGGACACATCAGATTTTAAAGCTTTTACAAGTGAAGTTCAAGTCTTAACAGAAATCAAACACCGTAACATTGTGAAGTTATATGGATTTTGTTCACATTCACGATTCTCATTTTTGGTTTATGAGTTCTTGGAAGGAGGTAGCTTGGATCAAATACTAGACAATGAAACACATGCAATGACATTTGATTGGAAAAGGAGGGCGAATGTTGTCAAAGGATTGGCCAATGCTTTATCTTATATGCACCATGATTGTTCACCTCCTATAATTCATCTTGACATATCAAGTAAGAATGTTCTTCTAGATCTTGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGATTCTGAAGCCTACTTCATACAGTTGGAGCCCACTTGCTGGCACCTTTGGTTATATTGCTCCAGAGCTTGCCCAGACAATGAAAGTGAATGAAAAATGTGATGTTTATAGTTTTGGAGTACTTTCCTTAGAGATTCTTATCGGAAAGCATCCAGGAGAACTTATATCTTCACTATCATCGTCATTGGCTCATGATTTACTCTTGATTGATGTGTTAGACAAACGGCCTCCTCATCCAGTAAAATCAATTGTTGGGGAGGTCATCGTGATAGCAAGGTTGGCATTTGCTTGCTTGAGTGAAAATCCACATTCTCGCCCAACCATGGAACAAGTATCTAAAGAGTTGATGATGGGAACATCACCTATAGTAGAGCAGTTCCCTATGATGAGACTGGAACAACTACAGTAG 3207 0.3761 MSVKGRSSGWWIPLMLLCVILILSSSCVAGFSRNAPLISSAVYNEVNGLLKWKASFDKHSQALLSSWKGNDPCKWDGILCDKSKSLSSVNLANYGLQGTLHTLNFSLFSNLHTLNIYNNSFGGTIPPQIGNMSKVNRLNLSLNSFDGPIPKEMWTLRSLRGLDISMCHLNGAIPNSIANLANLSILNLASNNLFGYIPLEIGKLQKLEYLDIGYNSLSGSIPQEIGMLTNLRYIDLSRNTISGTIPSTIGNMSNLKELYLERNTLFGPIPPSMWNLTNLSSFFLNDNKLFGSIPAFIENLVNLVFLEFYNNNFYGPIPSTIGNLTKLTGLGFGLNKFSGSIPASIGNLINLDTLTLQGNNLSGSIPSTMGNLILLTRLGLSSNKLNGSIPKEMNNITNLYNVQLSDNDFIGHLPPQICIGGSLAFLAADNNHLTGPTPTSLKNCSTLTRLRLEENQIKGNITEDFGIYPNLKYIDLSDNQYYGHISPNWGKCLNLDSFKISNNNISGGIPPQLVEATNLGRLYLFSNNLSGTLPKELGNLKSLVEIKISNNNFCGSIPTEIGLIMNLQHLDLAGNEFSGTIPKQVVRLPNLLELNLSNNKIEGNIPSEFSQLQPLESLDLSSNLLSGTIPTIIGELRRLQLLNLSHNHLSGIIPSSFDEMSSLISVNIAYNQLEGPLPKNQAFLKSSTDSLRNNKGLCGNVTGLMHCPTNHKSKIHKVMLLVLCLILPTSIFCGVGISIYILCGKWREKQTHVEQQTGELFSIWSYDGKITFENIIEATENFDDKYLIAVGGQGYVYKVELAVGLVVAVKKLNSVTNEDTSDFKAFTSEVQVLTEIKHRNIVKLYGFCSHSRFSFLVYEFLEGGSLDQILDNETHAMTFDWKRRANVVKGLANALSYMHHDCSPPIIHLDISSKNVLLDLEYEAHVSDFGTAKILKPTSYSWSPLAGTFGYIAPELAQTMKVNEKCDVYSFGVLSLEILIGKHPGELISSLSSSLAHDLLLIDVLDKRPPHPVKSIVGEVIVIARLAFACLSENPHSRPTMEQVSKELMMGTSPIVEQFPMMRLEQLQ* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1511 1068 Gene3D Transferase(Phosphotransferase) domain 1 861 1055 - -
Apr2g1511 1068 Pfam Leucine rich repeat 229 289 IPR001611 GO:0005515
Apr2g1511 1068 Pfam Leucine rich repeat 566 625 IPR001611 GO:0005515
Apr2g1511 1068 Gene3D Phosphorylase Kinase; domain 1 743 860 - -
Apr2g1511 1068 SUPERFAMILY L domain-like 423 699 - -
Apr2g1511 1068 Gene3D Ribonuclease Inhibitor 296 374 IPR032675 -
Apr2g1511 1068 Gene3D Ribonuclease Inhibitor 375 710 IPR032675 -
Apr2g1511 1068 Pfam Leucine Rich Repeat 638 658 IPR001611 GO:0005515
Apr2g1511 1068 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 185 - -
Apr2g1511 1068 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 176 267 - -
Apr2g1511 1068 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 256 1067 - -
Apr2g1511 1068 Pfam Protein kinase domain 788 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1511 1068 Pfam Leucine rich repeat N-terminal domain 45 81 IPR013210 -
Apr2g1511 1068 Gene3D Ribonuclease Inhibitor 42 196 IPR032675 -
Apr2g1511 1068 Gene3D Ribonuclease Inhibitor 197 295 IPR032675 -
Apr2g1511 1068 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Apr2g1511 1068 PANTHER LRR RECEPTOR-LIKE KINASE 176 267 - -
Apr2g1511 1068 PANTHER LRR RECEPTOR-LIKE KINASE 256 1067 - -
Apr2g1511 1068 PANTHER LRR RECEPTOR-LIKE KINASE 14 185 - -
Apr2g1511 1068 ProSiteProfiles Leucine-rich repeat profile. 590 612 IPR001611 GO:0005515
Apr2g1511 1068 SMART LRR_typ_2 228 252 IPR003591 -
Apr2g1511 1068 SMART LRR_typ_2 348 372 IPR003591 -
Apr2g1511 1068 SMART LRR_typ_2 108 132 IPR003591 -
Apr2g1511 1068 SMART LRR_typ_2 276 300 IPR003591 -
Apr2g1511 1068 SMART LRR_typ_2 588 612 IPR003591 -
Apr2g1511 1068 SMART LRR_typ_2 180 204 IPR003591 -
Apr2g1511 1068 SMART LRR_typ_2 636 659 IPR003591 -
Apr2g1511 1068 SUPERFAMILY RNI-like 88 410 - -
Apr2g1511 1068 SUPERFAMILY Protein kinase-like (PK-like) 764 1048 IPR011009 -
Apr2g1511 1068 SMART LRR_sd22_2 204 219 - -
Apr2g1511 1068 SMART LRR_sd22_2 276 302 - -
Apr2g1511 1068 SMART LRR_sd22_2 228 254 - -
Apr2g1511 1068 SMART LRR_sd22_2 612 638 - -
Apr2g1511 1068 PRINTS Leucine-rich repeat signature 615 628 - -
Apr2g1511 1068 PRINTS Leucine-rich repeat signature 636 649 - -
Apr2g1511 1068 ProSiteProfiles Leucine-rich repeat profile. 638 659 IPR001611 GO:0005515
Apr2g1511 1068 ProSiteProfiles Protein kinase domain profile. 782 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1511 1068 ProSitePatterns Tyrosine protein kinases specific active-site signature. 906 918 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1511 Apr-Chr2 21053811 21057283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1511 17 954 Receptor kinase-like Gene Family AT4G08850 42.618 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr2g1511 Pkinase 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1511 - - gmx:100815688 1315.06