Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1505 ATGGCCAACGGAGACGTGATTCCTTCTACATTCCAAACAGGTCTTAGAGTCCTTGCCATTGACCATGACATCAATTCCCTTGAAATCATCAAGCAACTGTGCATTGCTTTCGACACATGCTCCGATAGTTTACTTGCTTTGAATCTTGTTCATGAAAGAAAAGGGTGTTTTGATATCATACTCATTGATGTTCACATGCCAAATATGGATAGCTACGAATTTCTTCGCCGTGTTATCCAAGATATCGACGTTCTTGTTATCATGATGTCAGATGATGATGATGATGAAAGTGCGATATTAAAGTCAATGAATGACGGGGCTTGTGATTTATGGACTAAACCACTGCGTGAGTATGATGTTAGGAATATGTGGCGGCATGTTGCAAGGAAAGTTTTGAATGATAAAAAAAACCAAAAGAAACTTGGCAGTTTGGATAATAATAATGGCCAAAATCAGAGGAATGGCGATTCTGAGGTGAATTCTTCTGTTATCAATGCAACTGAAGGAGTCCAAACAAATAGCAATTTAAACGAATCAGAAAATAATTATCAACCTCCGGCAAGGAGGCCCCGTCTGGTGTGGACATCAGCATTGCATAATCATTTTGTTGCTGTTGTGAACCAACTTGGGGTTGACAAAGCTGTGCCAAAGAGAATTCTTGAATTGATGAATGTCCCTGGTCTGACAAGAGAGAATGTTGCTAGTCATTTGCAGAAACATAGACTTCATTTGAAAAGCAAGAATGAAGCTGCCCGGCAACAAAACGAGATGTCAATGGCAAACACTGTTCCTAGTTCTACAGAAACTAATGCTGAAGCCCCACGAGAGATGCCAATGCCAAACACCGTTCCTAGTTCTACAGAGATGTCAATGCCAAACACCGTTCCCAGTTCTACAGAAACCAGTGCTGATGACTTTCAAGCTTTGGCTGCTGCTACTAATCTTTCCTATGAAACACTGCCAAATCTTCCTCCCAACATGATGCTAACAGAGGCCCAAAATGCACTTATAGGATGGTCCAACCAGTACAATACAGAACAAACTAACGCATATGCTCATGCTCCTCTTAACATGGCCATGCCTTTAGACCATGATTCAACAAGTTACCTGACATGGCCTCCATCTAATACAATTGATAATTTAGTTGGAAACTTTGGCACATTATTGGCAGATCAAAGGCAAGAGAATCAACTATCACTCTTACATCATCATGTCCATAGTCAACCTCCGCCCATAACGGTTTCTGGAAGCTTTTCTTCTGCTATCCATAATTACAACTTTAGACGAAACACTCTGATTGACCATGGCTTACTGTCACCTCAACCTCAACTAAGTAGTTCACTTGGTGCTGTTGAAGTTCCTGGTGAAAACGGAGGCATATTCCATCTTCGAAACTCAATTTTGCCAAGGAGTGCCATGAGAATTATTTCTGACATTTAA 1440 0.4083 MANGDVIPSTFQTGLRVLAIDHDINSLEIIKQLCIAFDTCSDSLLALNLVHERKGCFDIILIDVHMPNMDSYEFLRRVIQDIDVLVIMMSDDDDDESAILKSMNDGACDLWTKPLREYDVRNMWRHVARKVLNDKKNQKKLGSLDNNNGQNQRNGDSEVNSSVINATEGVQTNSNLNESENNYQPPARRPRLVWTSALHNHFVAVVNQLGVDKAVPKRILELMNVPGLTRENVASHLQKHRLHLKSKNEAARQQNEMSMANTVPSSTETNAEAPREMPMPNTVPSSTEMSMPNTVPSSTETSADDFQALAAATNLSYETLPNLPPNMMLTEAQNALIGWSNQYNTEQTNAYAHAPLNMAMPLDHDSTSYLTWPPSNTIDNLVGNFGTLLADQRQENQLSLLHHHVHSQPPPITVSGSFSSAIHNYNFRRNTLIDHGLLSPQPQLSSSLGAVEVPGENGGIFHLRNSILPRSAMRIISDI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1505 479 MobiDBLite consensus disorder prediction 280 300 - -
Apr2g1505 479 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 354 IPR045279 GO:0009736
Apr2g1505 479 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 245 IPR017930 -
Apr2g1505 479 SUPERFAMILY CheY-like 13 145 IPR011006 -
Apr2g1505 479 SUPERFAMILY Homeodomain-like 187 246 IPR009057 -
Apr2g1505 479 Pfam Myb-like DNA-binding domain 193 240 IPR001005 -
Apr2g1505 479 SMART REC_2 15 124 IPR001789 GO:0000160
Apr2g1505 479 MobiDBLite consensus disorder prediction 253 300 - -
Apr2g1505 479 MobiDBLite consensus disorder prediction 136 158 - -
Apr2g1505 479 Pfam Response regulator receiver domain 28 122 IPR001789 GO:0000160
Apr2g1505 479 Gene3D - 187 246 - -
Apr2g1505 479 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 9 354 - -
Apr2g1505 479 MobiDBLite consensus disorder prediction 142 158 - -
Apr2g1505 479 ProSiteProfiles Response regulatory domain profile. 16 128 IPR001789 GO:0000160
Apr2g1505 479 Gene3D - 15 147 - -
Apr2g1505 479 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Apr2g1505 479 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1505 Apr-Chr2 21018848 21021103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1505 45 257 Response Regulator Gene Family AT3G16857 39.831 1.69e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr2g1505 Response_reg 6.5e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1505 - K14491 aprc:113871558 280.796