Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1502 ATGCTCACGAGGAGAAAATTCCTCAACTTGTTCTCAACCCTCAACTTTTCTCAACTCGTTCCTCACCCGCAACACCATTTTCCCAAACCTCCCAAACCGTTTAGGGTTTTACTCTTCTATGGAACCCAAGCATCCAAATTTCCGGAATACGAGATGCCATCGGTGACGTGGGGCGTGATTCGGGGTCGCAAGGAGATGCTCGTATCACGGGTAATCATCTTCGACTACCTCAAGGTTTTGGGAATCATCCCCGATGAGCTGCACGACCTTGAGCTTCCTTCAACGGTTGAGGTCATGCGCGAGCGCGTCGAGTTTCTTCAAAAATTGGGTGTAACTGTTGATGACATGAACAATTACCCTTTAATGTTGGGGTGCAGTGTGAGGAAAAACATGATCCCTGTGTTGGGGTACTTGGAAAAAATTGGGATTTCAAGGTCCAAACTTGGGGAGTTCGTTAGGAATTACCCACAAGTGTTGCATGCTAGTGTTATTGTTGAGCTTGCTCCTGTTGTCAAGTGCCTCAGGGGGCTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAAAAGTACCCTGAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGCACTTCTGTGGCTTATCTTGTTAGTATTGGTGTTAATCCTAGGGATATCGGTCCAATGGTAACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGTACTATGATAATGCCTATGATTGATTACTTGATCAATTTGGGGCTGCCAAAGAAGGTTTTGGCAAGGATGTTGGAGAAGAGAGCTTATATACTTGGATATGATCTTGAAGAGACTGTGAAACCAAATGTGAATTGTTTGCTCAGTTTTGGTGTGAGGAGGGAGAGTTTGCCTTCTGTTATTGCTCAATATCCGCAGATTCTTGGGTTGCCTCTTAAGGCAAAATTGTCCTCGCAGCAATACTTTTTCAGTTTGAAGCTTAAGATTGAGCCTGAAGGGTTTGCACGAGTGGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAACATGTGATTATGAAGCCTGTTGAGTTCCTCGTTGGGAGGACGATACCGGCGCATGATGTGGCTAGTATGGTGATCAAGTGTCCTCAGTTGGTGGCACTGAGAGTTGAGCTCATGAAGAACAGTTATTACTTCTTCAAGAGTGAGATGGGGAGACCCTTGAAAGAGCTTGTGGATTTTCCGGAATACTTTACTTATAGTTTGGAATCCAGGATCAAACCCAGATACCAGAGGCTAAAGACCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGGTTTGAAGAGAGGTTGCAGGGTAATTACATTGAAACTGAAAGTTTAGGTCCAACATTCTGTATGGGTGGGAAATTAGAGCTACCGGGGAATGCCATAGTGTCAGATGAGGAAGAGGAGAGTGATGATGAAGTACTATACAGAAGAACTGTTTCTCTTTAA 1482 0.4474 MLTRRKFLNLFSTLNFSQLVPHPQHHFPKPPKPFRVLLFYGTQASKFPEYEMPSVTWGVIRGRKEMLVSRVIIFDYLKVLGIIPDELHDLELPSTVEVMRERVEFLQKLGVTVDDMNNYPLMLGCSVRKNMIPVLGYLEKIGISRSKLGEFVRNYPQVLHASVIVELAPVVKCLRGLDVEREDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIMPMIDYLINLGLPKKVLARMLEKRAYILGYDLEETVKPNVNCLLSFGVRRESLPSVIAQYPQILGLPLKAKLSSQQYFFSLKLKIEPEGFARVVEKMPQVVSLHQHVIMKPVEFLVGRTIPAHDVASMVIKCPQLVALRVELMKNSYYFFKSEMGRPLKELVDFPEYFTYSLESRIKPRYQRLKTKGIRCSLNWMLNCSDQRFEERLQGNYIETESLGPTFCMGGKLELPGNAIVSDEEEESDDEVLYRRTVSL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1502 493 Pfam mTERF 135 443 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 PANTHER EXPRESSED PROTEIN 41 476 - -
Apr2g1502 493 SMART mt_12 330 360 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 365 396 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 397 428 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 293 325 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 SMART mt_12 185 216 IPR003690 GO:0003690|GO:0006355
Apr2g1502 493 Gene3D Transcription termination factor 3, mitochondrial 240 453 IPR038538 -
Apr2g1502 493 Gene3D Transcription termination factor 3, mitochondrial 98 239 IPR038538 -
Apr2g1502 493 PANTHER CGI-12 PROTEIN-RELATED 41 476 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1502 Apr-Chr2 20997997 21000790 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g1502 mTERF 6.4e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1502 K15032 - gmx:100809590 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1502 2 20997997 21000790 Apr6g1022 6 14931935 14933787 PCT