Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1489 ATCATGCTTGACTTAACACATAGCGCTACATGCAAAAAGAGGTGGCGAGTGGCTTTCACTGCCATCGCTTTCATCAAGCCTCTTCTTAAGTCCAAAGACATTAATGCTAGGAGCCTCACGCGCTCCTTCTCATTTGTAGCCATTGATGTGAACCATGACCCCAAACTGCTCATTGGAATCGTGAGGGAGAAAAACATGGAATCATTGACCCGATTTGGAGGCGTGAAAGAAGTGGTTACACTTCTTCAAACCGATGTGAAGAGTGGCGTCAGAGACAACCAGGTGGAAATTGATCACAGAAAGCATGTCTTTGGTGTCAACATGTTCCAGAAACCTCCAGCCAAAGGTTTTTTGTCCTTTGTACTTGAAGCTTTTAAGGATACCACAATTATTATCCTTTTGGTTTGTGCTGTGCTTTCCCTTGGCTTTGGTATAAAGCAACATGGGTGGAAGGATGGATGGTATGATGGAGGTAGCATCATATTGGCTGTTATTTTGGTTATTGTTGTCTCTTCTGTGAGCAACTTCAAGCAATCTAGACAATTTGAAAAACTTTCTGCCAAGAGTGACAACATAGGAGTTGAAGTTATTAGAGGAGGTAGACACCAAACCATATCAATCTTTGATGTGGTGGTTGGTGACATTGTTTACTTGAAGATTGGTGATCAGGTTCCAGCTGATGGGTTGTTTTTGGAAGGGCATTCATTGACGGTGGATGAATCTAGCATGACAGGAGAAAGTGATCATGTGAATGTAAACGGAAACACAAACCCTTTTTTGATCTCTGGGACAAAGGTTACTGATGGATTTGCAAACATGCTTGTTACTTCTGTGGGTATGAACACTGCATGGGGTGACATGATGAGTTCCGTAACTAGAGAGCTTAATGAGGAGACACCTTTGCAAGCACGTCTCAACAAGTTGACTTCTGGTATTGGCAAAGTTGGGTTGTTGGTGGCTGTTATTGTTCTTGTGGTCTCTATGATACGTTATTTCACAGGAAGCACAAGAGATGACATGGGGAACCGGGAATTCTTTGGAGGCAAGACTAGTTTTGGTGATGCTATGAATGCAATTGTGGGAATTGTTGGCGCAGCAGTGACAATTGTGGTGGTGGCAATTCCTGAGGGGTTGCCTTTAGCTGTTACTTTGACTCTGGCTTATTCTATGAAGAAAATGATGAGGGATAATGCCATGGTGAGGAAAATCTCTGCTTGTGAGACAATGGGATCAGCAACAACAATTTGCACTGATAAAACTGGTACCCTTACACTGAATGAAATGAAGGTGACAGAGGTTTGGGTTGGGAAAGAAGCAATAGCAGAAGATGGCTATTTGAATCCTAGATTGGTGCAATTGTTGAAAGAAGGAATTGCTTTAAATACCACTGGAAGCGTTTACCAACCCCATCAAAATTCTGTGCCTGAAATTTCAGGCAGTCCAACTGAGAAAGCATTGCTTTCTTGGGCTGTGTTGGGTTTGGGGATGGATATTGATGAAGTGAAGCGAGATTGTGAAATAATTCATGTGGAGACTTTCAACTCTGAGAAAAAGAGAAGTGGGATTCTGATGAAGGGGAATAGAGGAGGAAGCACACTTCATACACACTGGAAGGGAGCTGCTGAGATGATATTGGCAATGTGTTCATACTATTATGATCATAGAGGGAGAATCATGACCATGGGTGATGAAGAAAGGGTTCAAATTGAGGACATTATCAATGGCATGGCAACCAAAAGTTTGAGATGCATTGCCTTTGCGGAAAAGTGCTGCACAGAGAACAATGGGCAGGTATGTGAAAAGCTTGAAGAGAGGAGACTAACATTGCTGGGGATACTTGGATTGAAAGACCCTTGTAGGCCAGGAGTTGAAGCAGCAGTTGAATCTTGCAAGAATGCTGGAGTGAATATCAAGATGATTACAGGAGATAATGTGCACACAGCAAGGGCTATAGCTTCTGAATGTGGGATTCTTGATCCTAATGAAGAATTGGATAAAGAATCAGTGGTTGAAGGCTTTCAATTCAGAAACTACTCACCTGAGGAAAGAATGGACAAGCTTGACAAAATCAGGGTCATGGCCAGATCATCTCCACTTGACAAGCTTTTGATGGTTCAATGTTTAAAGCAGAAGGGTCATGTGGTGGCAGTCACAGGTGATGGCACAAATGATGCACCTGCTTTGAAAGAAGCAGATATTGGACTTTCTATGGGAATACAAGGCACTGAAGTGGCAAAAGAGAGTTCAGATATTGTGATCCTTGATGACAATTTTTCTTCTGTGGTAACAGTACTAAGATGGGGAAGAGGTGTGTACACAAACATTCAGAAGTTCATTCAGTTTCAGCTCACAGTCAATGTTGCTGCACTTGTCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTACAGCAGTGCAGCTTTTGTGGGTAAACCTCATAATGGACACTCTTGGTGCTTTGGCCTTGGCCACTGAGGAACCCACTAATGATCTCATGAAGATGCCGCCTGTAGGTCGACATGAGCCACTTATAACCAAAGTTATGTGGAGAAACCTCATTTCACAGGCACTGTATCAAGTGGCTGTCTTGTTGGTTTTACAATTCAAGGGAAGATCAATCTTTGATGTCAATGAGAAAGTGAAGAACACACTTATTTTCAATGCTTTTGTCTTATGCCAAGTCTTCAATGAGTTCAATGCTAGGAAACTGGAGAAGAAAAACATCTTTGAGGGACTAGGTAAAAATAAGTTGTTTATAGTAATCGTGGGCCTAACTATAGCTCTTCAGATATTTATGGTTGAGTTTCTGAAGAAGTTTGCTAACACTGAGAGATTGACTTGGGAACAGTGGGGTGTTTGCATTGGCATTGGTGCTTTGTCTTGGCCAATTGGACTCCTCGTGAAGTATATCCCAGTTGTTCCCAACTACCAGTAG 2943 0.423 IMLDLTHSATCKKRWRVAFTAIAFIKPLLKSKDINARSLTRSFSFVAIDVNHDPKLLIGIVREKNMESLTRFGGVKEVVTLLQTDVKSGVRDNQVEIDHRKHVFGVNMFQKPPAKGFLSFVLEAFKDTTIIILLVCAVLSLGFGIKQHGWKDGWYDGGSIILAVILVIVVSSVSNFKQSRQFEKLSAKSDNIGVEVIRGGRHQTISIFDVVVGDIVYLKIGDQVPADGLFLEGHSLTVDESSMTGESDHVNVNGNTNPFLISGTKVTDGFANMLVTSVGMNTAWGDMMSSVTRELNEETPLQARLNKLTSGIGKVGLLVAVIVLVVSMIRYFTGSTRDDMGNREFFGGKTSFGDAMNAIVGIVGAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRKISACETMGSATTICTDKTGTLTLNEMKVTEVWVGKEAIAEDGYLNPRLVQLLKEGIALNTTGSVYQPHQNSVPEISGSPTEKALLSWAVLGLGMDIDEVKRDCEIIHVETFNSEKKRSGILMKGNRGGSTLHTHWKGAAEMILAMCSYYYDHRGRIMTMGDEERVQIEDIINGMATKSLRCIAFAEKCCTENNGQVCEKLEERRLTLLGILGLKDPCRPGVEAAVESCKNAGVNIKMITGDNVHTARAIASECGILDPNEELDKESVVEGFQFRNYSPEERMDKLDKIRVMARSSPLDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRGVYTNIQKFIQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEEPTNDLMKMPPVGRHEPLITKVMWRNLISQALYQVAVLLVLQFKGRSIFDVNEKVKNTLIFNAFVLCQVFNEFNARKLEKKNIFEGLGKNKLFIVIVGLTIALQIFMVEFLKKFANTERLTWEQWGVCIGIGALSWPIGLLVKYIPVVPNYQ* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1489 980 Pfam E1-E2 ATPase 194 395 - -
Apr2g1489 980 Pfam haloacid dehalogenase-like hydrolase 413 732 - -
Apr2g1489 980 CDD P-type_ATPase_Ca_PMCA-like 97 851 - -
Apr2g1489 980 SUPERFAMILY Calcium ATPase, transduction domain A 194 291 IPR008250 -
Apr2g1489 980 Pfam Cation transporter/ATPase, N-terminus 74 140 IPR004014 -
Apr2g1489 980 SUPERFAMILY Calcium ATPase, transmembrane domain M 73 975 IPR023298 -
Apr2g1489 980 Pfam Cation transporting ATPase, C-terminus 803 973 IPR006068 -
Apr2g1489 980 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 64 975 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Apr2g1489 980 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 160 333 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1489 980 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 358 443 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1489 980 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 689 800 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1489 980 SFLD p-type atpase 398 769 IPR044492 -
Apr2g1489 980 Gene3D - 95 292 - -
Apr2g1489 980 Gene3D - 123 971 - -
Apr2g1489 980 PRINTS P-type cation-transporting ATPase superfamily signature 239 253 - -
Apr2g1489 980 PRINTS P-type cation-transporting ATPase superfamily signature 416 430 - -
Apr2g1489 980 PRINTS P-type cation-transporting ATPase superfamily signature 611 622 - -
Apr2g1489 980 PRINTS P-type cation-transporting ATPase superfamily signature 633 643 - -
Apr2g1489 980 PRINTS P-type cation-transporting ATPase superfamily signature 718 737 - -
Apr2g1489 980 PRINTS P-type cation-transporting ATPase superfamily signature 742 754 - -
Apr2g1489 980 ProSitePatterns E1-E2 ATPases phosphorylation site. 418 424 IPR018303 -
Apr2g1489 980 SUPERFAMILY HAD-like 414 823 IPR036412 -
Apr2g1489 980 PRINTS H+-transporting ATPase (proton pump) signature 569 587 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1489 980 PRINTS H+-transporting ATPase (proton pump) signature 718 734 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1489 980 PRINTS H+-transporting ATPase (proton pump) signature 750 775 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g1489 980 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 422 623 IPR023299 GO:0000166
Apr2g1489 980 PANTHER CALCIUM-TRANSPORTING ATPASE 11 966 - -
Apr2g1489 980 SMART Cation_ATPase_N_a_2 68 145 IPR004014 -
Apr2g1489 980 SFLD C1.7: P-type atpase like 398 769 - -
Apr2g1489 980 PANTHER CATION TRANSPORTING ATPASE 11 966 - -
Apr2g1489 980 Gene3D - 426 618 IPR023299 GO:0000166
Apr2g1489 980 Gene3D - 413 763 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1489 Apr-Chr2 20910563 20913505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1489 11 975 Primary Pumps ATPases AT3G63380 63.939 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1489 K01537 - gmx:100784119 1504.19