Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1469 ATGTTCAAACTTGCATTTATTTGCTTTGTTGCTCCTCTGTTTCTCTTATTCACTAATACCTCTAGTAGCCACAACACTTCATCTTCAACAAATTGCCCCACTTACCATTGTAAAAATGGACCTAACATCAGTTACCCCTTTTGGCTCTCCCAAGGCTCACCTCCTGATCAATATTGCGGGTACCCAGAATTTGGCCTTATTTGTTCTGATCATGGTGACCCCATTTTTTCTCCACCCCCTGGATATTACTATTACGTTAAAAACGTAGACTACGGAAAACATAGTCTTAACCTCGTTGATTTTGACACTGCAAACCAAACTTGTCCAAGAGCACTTCACAAGGTTCCTCTGGGAAATCTACCACTTTCTCAATCTTCCTTGAACTTAAACCTTGGCTTTTACTACAACTGCACTAGTTACCCTTCTGGGGTACCTTCTATCAAGTGTCTCAGTTTTGGGGTGAAGGAGTCTTTTGTGTTTGTGATGGGGAACGAGACTAAAGGTTTTGACTGGTTGGAAAACTGCGAGGCAAACGTTATGGTGACGGTGATGAAGGATCAGATTACAAGTGATAATGGGTTGATGCATCAGTTTGCTGGGGCTATTAGTGAAGGGTTCGTACTTGAATGGCGAACATCTTCGAATTGTGTTGAGTGTGAGGCTAGTAATGGACTTTGTGGCTATAGTAATACCAGGAAGGAGGTGCTGTGCTTCTGCAATGATGGCACTACAAGAAGCAACAAATGTGATGCAGGGGGAAGCAGCACCGGTTTGTCAAGATTAATTATTGGTTTAGTAGCTGGAGGAATTGGGGCACTGCTGATATGCATCCTACTTTGCATTTTTAGACGTCAATTATCACCATTTGTGTCAAAAATTTGGACGACCAGAAAGATTGATAAAGATATTGAGGCCTTCATCAGAAATAATGGGCCTCTAGCCATAAAAAGATACTCGTATTCAGAGATCAAGAAAATGACCAACTTTTTCAAATCCAAACTGGGACAAGGTGGTTATGGTCAAGTCTATAAAGGAAATCTAAACAACAACTCTCTTGTGGCCGTGAAGGTATTGACAGCTTCAAAGGGGAACGGGGAAGAATTTATCAATGAAGTTATAAGCATAAGTAGAACATCCCACGTAAATATTGTCAAGCTCCTTGGTTTTTGTCTTGAAGGGAAGAAGAAAGCTCTTATCTACGAATTTATGCCCAATGGATCACTTGAAAAGTTCATACACAACAAGAGTTTTGAAACTAATCCACCTTTGAGTTGGGAAAGATTACACCGCATTGCAGAAGGTATAGCCAAAGGATTGGAATATTTGCATAAGGGGTGCAACACTCGGATATTGCATTTTGACATAAAACCAAGCAACATCCTTTTGGATAAAAATTTCTGTCCTAAAATCTCGGATTTTGGGTTGGCTAAGCTCTGCTCAAAAACACACAGTATCATCTCTCTGTGTGATGCTAGAGGGACAATTGGGTATATTGCTCCAGAAGTGTGGAACAGAAACTTTGGAGGAGTGTCACATAAGTCTGATGTCTATAGTTATGGAATGATGATTTTGGAAGTGGTTGGAGGAAGGCAGAATGTTAGTATTGAAGCAAGTCATTCAAGTGAGACTTATTTTCCTCATTGGATATACAAGCATATTGAGGTGGGTAGCAATTTACCATGGCATGATGGTATGACCACAGAGGAAAATGAAATTTGTAAGAAAATGATTATGGTGGGATTGTGGTGCATACAAACAATCCCATCTGATAGGCCTCCAATGAGTAGGGTGGTTGAAATGTTAGAAGGAAGCATAGATCAGTTCCAAATTCCACCAAAGCCTTTCGTATTTTCTCCTATGATAACCGAAGTGGATATTTGCACTACTAGTAACTTTGATTGA 1902 0.4022 MFKLAFICFVAPLFLLFTNTSSSHNTSSSTNCPTYHCKNGPNISYPFWLSQGSPPDQYCGYPEFGLICSDHGDPIFSPPPGYYYYVKNVDYGKHSLNLVDFDTANQTCPRALHKVPLGNLPLSQSSLNLNLGFYYNCTSYPSGVPSIKCLSFGVKESFVFVMGNETKGFDWLENCEANVMVTVMKDQITSDNGLMHQFAGAISEGFVLEWRTSSNCVECEASNGLCGYSNTRKEVLCFCNDGTTRSNKCDAGGSSTGLSRLIIGLVAGGIGALLICILLCIFRRQLSPFVSKIWTTRKIDKDIEAFIRNNGPLAIKRYSYSEIKKMTNFFKSKLGQGGYGQVYKGNLNNNSLVAVKVLTASKGNGEEFINEVISISRTSHVNIVKLLGFCLEGKKKALIYEFMPNGSLEKFIHNKSFETNPPLSWERLHRIAEGIAKGLEYLHKGCNTRILHFDIKPSNILLDKNFCPKISDFGLAKLCSKTHSIISLCDARGTIGYIAPEVWNRNFGGVSHKSDVYSYGMMILEVVGGRQNVSIEASHSSETYFPHWIYKHIEVGSNLPWHDGMTTEENEICKKMIMVGLWCIQTIPSDRPPMSRVVEMLEGSIDQFQIPPKPFVFSPMITEVDICTTSNFD* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1469 633 PANTHER - 14 630 - -
Apr2g1469 633 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 630 IPR045874 GO:0004672
Apr2g1469 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Apr2g1469 633 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Apr2g1469 633 Pfam Wall-associated receptor kinase C-terminal 155 242 IPR032872 -
Apr2g1469 633 SUPERFAMILY Protein kinase-like (PK-like) 311 602 IPR011009 -
Apr2g1469 633 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1469 633 CDD STKc_IRAK 334 603 - -
Apr2g1469 633 Pfam Wall-associated receptor kinase galacturonan-binding 32 100 IPR025287 GO:0030247
Apr2g1469 633 Gene3D Transferase(Phosphotransferase) domain 1 403 610 - -
Apr2g1469 633 Pfam Protein tyrosine and serine/threonine kinase 331 601 IPR001245 GO:0004672|GO:0006468
Apr2g1469 633 Gene3D Phosphorylase Kinase; domain 1 305 402 - -
Apr2g1469 633 ProSiteProfiles Protein kinase domain profile. 328 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1469 Apr-Chr2 20722641 20730763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1469 2 616 Receptor kinase-like Gene Family AT5G38260 41.745 7.26e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr2g1469 PK_Tyr_Ser-Thr 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1469 - - gmx:100781977 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1469 2 20722641 20730763 Apr2g1469 2 20722641 20730763 ECH
Apr2g1469 2 20722641 20730763 Apr6g1046 6 15154372 15158102 PCT
Apr6g1047 6 15159484 15160603 Apr2g1469 2 20722641 20730763 PCT