Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1465 ATGGAGACGCCGTTAGACGGAGGAGGAGGAGTGGCGGTGCTCTCGAATTCCATCAACAAGGTCGATTCTTCATCGGCTCTATATGGCGGCTTGAAGTGCTCGAAACCGGAGTCGCCTATTTTGATTTTCTTGTTCTTTCACAAAGCGATTCGGAATGAGCTTGACGTGCTGCACCGATTGGCCATGGCATTTGCCACCGGCAATCGCTCGGATATTCAGCCGCTCTCCGAGCGCTACCATTTCCTCAACTCCATGTATAGGCACCACTCCAATGCAGAAGATGAGGTGATTTTTCCTGCCCTAGATATACGTGTGAAGAATGTAGCACAGACTTATTCTCTCGAGCACAAGGGTGAAAGCAATCTTTTTGATCATCTATTTGAGCTGTTAAATTCATCCATGCATGACGATGAAAGTTTTCCAAGAGAGTTAGCATCCTGCACAGGAGCTTTGCAGACATCAGTTAGTCAACACATGGCAAAGGAAGAGGAGCAGGTATTTCCTCTGCTTATTGAGAAATTCTCTCTGGAGGAACAGGCATCCTTGGTTTGGCAGTTTCTTTGCAGCATTCCTGTGAATATGATGGCAGAATTTCTACCATGGCTTTCAAGATCTCTATCACCAGATGAATCTCAGGATTTGCGAAATTGCTTAATCAAGATAGTGCCACAGGAAAAGCTTCTTCAGAAGGTTGTCTTCACCTGGATGGAAGGGAGCCATAACGTTAATACCACAGTGGAAACTTGTGTAGATCATTCTCAAGTTCAATGTAGTTCTAGGCCATTAACTCATCAGGTTGAGAAAGTAAACTGTGTATGTGAATCCACAACAACGGGAAAAAGGAAATATTCTGGATCTATGCTAGACATTTCTGATACCATTGGCACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAGAAAGAATTAAGTGAGATAGCAGTGGAGACCAGAAAGATACAACAATCTGGAGATTTTGCTAATCTATTAGCTTTTAACGAAAGGTTTCAGTTTATAGCCGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCAGCAGTAGATGGAGAATTTTCTTTCTGTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTCCGGTGTTTGATTGAAAGTATTCAAAGTGAAGGAGCATCATCTAATTCAGAAGTTGAATTTTATTCCAAGTTATGCACACATGCTGATCAAATAATTGAAACCATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCAAGAAAGCACTTTAGCTTTGGAAAGCAATGTGAACTTCTGTATCAAAGCTTATGCATGATGCCTCTAAAATTGATTGAGCGTGTCCTACCATGGTTGGTAGGATCTTTAACTGAAGATGAAGCAAAGACGTTTCTGACTCCAGCAACAGATTCTGCTCTAGTAACACTCTTCTGTGGTTGGGCTTGCAAGGCTCGTAATGAAGGTCTGTGTTTGTCTTCTGGTGCATCAGGTTGCTGTCCTGCTCAGAGACTTTCCGATATCGAAGAAAATATTGGTCAGCCATTCTGTGCTTGTGCATCTGCCTTATCAGGCAGGCATTGCTCAGTATTAGCTGAATCAATTGGTAACAGAAGGCCAGCCAAACGAAACATATTGGAGTCGCACAAAAATGGAGATGTACCTGAAACTTCAGAGACTGAAAGCATTCAGAAACAATGTTGTAATGCTCTGTCCTGCTGTGTGCCAGGTTTAGGAGTAAGCAGTAACAATTTGGGGCTGAGTTCTCTTTCTACAGCCAAGTCCTTACGCTCCTTGTCTTTCAGCTCTTCTGCCCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGAGAGCAACTCATGTGATGTTGGATCCACACAAAGACCAATTGATACGATATTTAAATTCCATAAAGCCATACGCAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTGAGGGTGATGAAACAATTCTCCGGCAATTTAATGGAAGATTTCGTCTTTTGTGGGGATTGTATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCAGCTTTAGAATCTAAAGAGGCTCTGCATAATGTGAGCCATTCATACATGCTGGACCATAAGCAGGAAGAACAATTGTTTGAAGATATTTCCTGTGTTCTTTCAGAGTTCTCTGTCCTGCATGAAGCCTTGCAGATGATCCATGAGCCAGAGGATTTTAGTGTAAGTAATTTTGGAGCCTCCGATGCCAATACCAGTGACGCTATCAAAAAGCATAATGAACTTGCTACTAAGCTTCAGGGGATGTGCAAGTCCATTAGAGTAACCCTGGATCAGCATCTTTTCAGAGAAGAGTGTGAACTCTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGTCGGATAATTGGAACTACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTAACTTCTGCACTTACTAAGGATGAACAGAACAAAATGATGGATACATGGAAGCAGGCAACTAAGAACACTATGTTCAATGAATGGCTTAGTGAATGCTGGAAGGAGAATCCAGTGTCTACAGCACAGACAGAAACATCAGATCATAGCACTTCCCGAAGAGGTGCTGAATATCAAGAAAGCTTGGACCACAATGATCAGATGTTCAAGCCAGGTTGGAAAGACATATTCAGGATGAATCAGAATGAACTTGAGTCAGAGATTCGGAAGGTATATCGTGACTCAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTACTGACAAGTCGGTGGATAGCTGCCCAGCAGAAGTTACCTGCTCTATCAGAAGGATCATCTAATGGTGAAGATATAGAAGGACACTCACCATCATTTCGGGACCCAGGGAAACATGTATTTGGGTGTGAGCACTATAAGAGAAATTGCAAGCTTCGAGCTGCATGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGACAATGTCAGTGATCACTCAATGGATAGAAAAGCAACCACAGAAATGATGTGTATGCACTGCCTGAATATACAGCCAATAGGACCTATATGCGTGACACCTTCATGTAACGGATTTTCAATGGCAAAGTATTATTGCAATATATGCAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAATTTATGCCGAGTTGGACAGGGGCTTGGGATTGATTATTTTCATTGCATGAAATGTAATTGTTGCCTGGGGATTAAATCAGCGTCTCATAAGTGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATTTGCTGCGATGACTTATTCACTTCAAGTGCTCCAGTCAGAGCTCTACCTTGTGGCCACTATATGCATTCTGCTTGCTTCCAGGCATACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCCCTATTGGCTGCTGAGGAGCTTCCTGAAGAGTATAGGGACCGCTATCAGGACATACTCTGCCATGATTGTGATCAGAAGGGAACTTCACTCTTCCACTGGTTGTATCACAAATGTGGATTTTGTGGCTCTTACAATACCCGGGTTATCAAATGTGAAGCATCAAATTCCAGCTGCTCTTAG 3696 0.4202 METPLDGGGGVAVLSNSINKVDSSSALYGGLKCSKPESPILIFLFFHKAIRNELDVLHRLAMAFATGNRSDIQPLSERYHFLNSMYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSMHDDESFPRELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSRSLSPDESQDLRNCLIKIVPQEKLLQKVVFTWMEGSHNVNTTVETCVDHSQVQCSSRPLTHQVEKVNCVCESTTTGKRKYSGSMLDISDTIGTHPIDEILLWHNAIKKELSEIAVETRKIQQSGDFANLLAFNERFQFIAEVCIFHSIAEDKVIFPAVDGEFSFCQEHAEEESQFNDFRCLIESIQSEGASSNSEVEFYSKLCTHADQIIETIQRHFHNEEVQVLPLARKHFSFGKQCELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKTFLTPATDSALVTLFCGWACKARNEGLCLSSGASGCCPAQRLSDIEENIGQPFCACASALSGRHCSVLAESIGNRRPAKRNILESHKNGDVPETSETESIQKQCCNALSCCVPGLGVSSNNLGLSSLSTAKSLRSLSFSSSAPSLNSSLFIWETESNSCDVGSTQRPIDTIFKFHKAIRKDLEYLDVESGKLSEGDETILRQFNGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSEFSVLHEALQMIHEPEDFSVSNFGASDANTSDAIKKHNELATKLQGMCKSIRVTLDQHLFREECELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTKDEQNKMMDTWKQATKNTMFNEWLSECWKENPVSTAQTETSDHSTSRRGAEYQESLDHNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSRWIAAQQKLPALSEGSSNGEDIEGHSPSFRDPGKHVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATTEMMCMHCLNIQPIGPICVTPSCNGFSMAKYYCNICKFFDDERNVYHCPFCNLCRVGQGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSAPVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQDILCHDCDQKGTSLFHWLYHKCGFCGSYNTRVIKCEASNSSCS* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1465 1231 Gene3D nmb1532 protein domain like 37 188 - -
Apr2g1465 1231 Gene3D nmb1532 protein domain like 300 446 - -
Apr2g1465 1231 MobiDBLite consensus disorder prediction 885 899 - -
Apr2g1465 1231 SUPERFAMILY Zinc hairpin stack 1052 1108 IPR037275 -
Apr2g1465 1231 Gene3D - 1186 1227 - -
Apr2g1465 1231 CDD Hr-like 642 802 - -
Apr2g1465 1231 ProSiteProfiles Zinc finger CHY-type profile. 979 1048 IPR008913 GO:0008270
Apr2g1465 1231 SUPERFAMILY CHY zinc finger-like 981 1042 IPR037274 GO:0008270
Apr2g1465 1231 SUPERFAMILY RING/U-box 1112 1167 - -
Apr2g1465 1231 CDD Hr-like 42 168 - -
Apr2g1465 1231 Pfam Hemerythrin HHE cation binding domain 297 431 IPR012312 -
Apr2g1465 1231 Pfam Hemerythrin HHE cation binding domain 44 170 IPR012312 -
Apr2g1465 1231 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 25 1230 - -
Apr2g1465 1231 SMART ring_2 1115 1156 IPR001841 -
Apr2g1465 1231 CDD RING-H2_Pirh2 1114 1157 - -
Apr2g1465 1231 MobiDBLite consensus disorder prediction 875 899 - -
Apr2g1465 1231 Pfam Ring finger domain 1114 1156 IPR001841 -
Apr2g1465 1231 PANTHER CHY ZINC FINGER PROTEIN 25 1230 - -
Apr2g1465 1231 CDD Hr-like 300 429 - -
Apr2g1465 1231 Pfam Zinc-ribbon 1162 1219 IPR039512 -
Apr2g1465 1231 Gene3D nmb1532 protein domain like 636 878 - -
Apr2g1465 1231 ProSiteProfiles Zinc finger CTCHY-type profile. 1051 1114 IPR017921 -
Apr2g1465 1231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1111 1159 IPR013083 -
Apr2g1465 1231 ProSiteProfiles Zinc finger RING-type profile. 1115 1157 IPR001841 -
Apr2g1465 1231 Pfam CHY zinc finger 986 1061 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1465 Apr-Chr2 20689535 20700245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1465 38 1231 C2H2 Transcription Factor Family AT3G18290 68.408 0.0 1675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1465 K16276 - gmx:100801725 2292.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1051 6 15202951 15213630 Apr2g1465 2 20689535 20700245 ECH
Apr2g1465 2 20689535 20700245 Apr2g1465 2 20689535 20700245 ECH
Apr2g1465 2 20689535 20700245 Apr6g1051 6 15202951 15213630 PCT