Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1450 ATGGGTTTTTCTCTCTCCGACTCTTCTCATGATCAACCTCAACTCATCCCACAACACCCATCATTGATTCAACGTCAACGTCTCATTGCATTCTCAGGGACTGAATGGCTTGAACTTAGGAACGGGAATTTGAATCATAATGTCTTCATTGCATTGAACCTAGTGATGGATTCCCAATCTGTTAACAGCAATACAGAATTCAGAGAATTGGGTAGCCCAAAAGCTAGTTCCCTTGGATTTCATAAAAATGGGAATTTTCTTTCCATCTATGGTGAGGTGGAAGCCAAACATCGATTGCTCTTAGTTCAGTGGTTATCTAGTCTTATACCTTCATTGTACTTTCCAATAAATGTCACGGATGGTGAGTTGAGAGCATGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTGAACAGGCTAAGACCTGGCACCGTGAATGTGGTTAGTGAACCTGATAATTCTCTGCCATCACACTCAGAAAATGTTAAATCCTTTCTGAAAGCTTTGGATGGAATGGGATTGCAACGGTTTGAAATATCAGACCTAGAGAAGGGGTCTATGAAGGCTGTTGTGGATTGTCTTTTGACCCTGAGAGCTAAAAGTTTGCAGAATGCTTTGGCTGATAATAATCATTCCAACTCGTCGAGCCCTGGTGGGAATTCACCTTTCACTTTTCCTTGTTCTCCACCATTTAATGGACAACCGAGGAGGGTTTCAGCTGGGTCAAAGTTGCAACGTGTCTTTAGTAGCCCACTTGTGGCGGCCGAGCCAGCTTCATTAATACACCATGTTAATCACAAATTCCATGAGGTGTTTCAACTGAAACCTGGAAGCTACGCAGATCTTCCTGCTGCAAAAATATCAGAAATGATGAAATCAAATAGTTTAGATAATGCTCCCACTCAGTCGCTTCTGAGTGTTGTGAATGGTATTCTTGAAGAAAGCTTGGAAAAAAGAAATGGGGAAATACCTCATCGTGTGGCTTGCTTGTTGAGAAAGGTTACTCAGGAGATTGAACGGCGCATGTCAACTCAAGCAGAACATTTACGAACTCAAAACAATCTTTTTAAGGCTCGTGAAGAAAAATACCAATCAAGAATAAGAGTACTCGAGGCACTTGCATCTGGAAATAGAGATGAGAGTGAGATATTTGCTAGCCAGTTTCAGCAGCTGATGGGTGAGAAGATCAAAGAGGAAGAAAAGAAGGATGAGGACAAAAGTTTGGAAATTTCAGCATTAAAGCAAGAACTAGAAACAGCCAAAAGAACATATGAAGTACAATTTTCACAGTTGGAAGAAGAATTGTTGCAGAAGGTTGAAGAATATGAGTTTCAATTGGAAGAGTTAAGAATTCAGGCTGAAAAGATTAAAGAGGAAGGAAGGACCGCAGATGAAAAAGAAATTATCAGATTGGTGAAAGAACAAGAGGAAAACAATATGGAAATTTTAGCATTGAAGCAAGAACTAGAAACAACCAAAAAAACATATGAAGTACAATGCTCACGGTTGGAAGCAGAAGCTAAAGATGCTAAAGCAGAATTGAGACACAAGTCTCAGGAATATGAGCATCGATTGGAAGAAATAAGAAATAAGACAGAAAAGATCAAAGAGGAAGCAAAGAAGGGAGATGAAAAAGAAATTATGAGGTTGATAAAAGAGCACGAGGACAAGAAAAACTCGGAAATTACCGCATTGAAGCAGGAATTCGAAACAACCAAAAAAATATATCAAGTACAATGCTCACAATTGGAAGCAGAAGCTAAGGATACTAAAGAAGAATTAAGACAAAAGTCTAAAGAATATGAGCATCGATTGGAAGAATTAAGAAACAACATTAAGGAACTTGAGGCTGCTTCTAATTCAAAATATCAGAAGTTGAAAATGAAAATGAGCCAATGGCAGACTGTTATAAAATTTCATTCCAGTTCACTACAGAATTTGAGATTATCTTGGGAATCTATTAAGCAAGATGTTAAGAAAGAACAAATGGCTTATGCAGAGGAGTGTAGTCGATTAGGTGTAAATATTAAATCACTGGTACAAGCAGCGGAGAACTATCGTGTCGTTCTTGCTGAAAATAAAAAATTGTTTAACGAGGTTCAAGAATTAAAAGGAAATATCAGAGTATATTGTCGAATTAGACCGTTTCTTTCTGGAAAAAGGGAAAAACAGTCTATTGTTGAACACATTGATGATAATGATTTGGTTGTGTCAAATCCATCCAAAGAAGGAAAAGATACTCATCGATCATTTAAGTTTAATAAGGTTTTCGGCCCTACAATAACTCAAGCGGAGGTATACGCTGACATTCAATCCTTCATAAGATCAGTACTTGATGGGTATAATGTGTGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGTGAGACTATTGGTGTTAATTATCGAGCTCTAAATGACCTCTTTAGCATTTCGACTAGTAGATCAACCTTCATCGTCTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTTCGTGACTTGTTATCAACTGAAGGTTCTTCAAAAAGAACACTTGGGATATTGACTCACTCTCAAGCAAAGGGCTTAGCAGTACCAGATGCTAGCTTGTTCCCTGTGAAGTCACCTTCAGATGTCATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTAGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATCCATGTTCGTGGGAAGGATTTGAAGTCTGGTTCTACTCAGGTTGGTAATCTTCATTTGGTGGATTTGGCAGGAAGTGAAAGGGTGGATCGTTCTGAAGTAACTGGAGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTCTCAGCTCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGCCCCCATGTACCTTACAGAAACAGCAAGCTCACTCAACTTCTCCAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTGTCCAAATTAACTCAGACGTAAGTTCATTTTCTGAAACTGTCAGCACTCTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCTCGAAGTAGTAAAGATGGCAAAGATGTCAGAGAATTAATGGAACAGGTGGCTTCAATGAAGAGCACTATTTTGGCAAAAGATGAGGAGATTGAGCGGCTTCATTTACACAAAGGTTCAGTTGGTAGTATTCTTAAACAAAACCAAAAATCACCAAGTGGAAGTATTAAGCACCATGAAGATGATACCCACCGATCAATAGTTGATCATATACACCAAAATGAATTTCTCCATCAACCTGGGCTTTCTGGAGAAGATATAGCAAAGAATATAGCTGCAAACATACAAACTCCAGGATTTTCAGATGCAGATCTTGATGAAAGATCAAGTGTTCATTCTGAAAATGATGTTGCTCCTCCAAGCATAGGAACTGATAGTTCTGAAAACTCCATTCTCACTGAAGGCACAAAATCATCTGATAAGATTGAGAAATCTAAAGCAATACCCAAAAATGTACATGTGGTGAGGAAATTAAGTCGAACATCGTCTATCACAACACCAACAAAGGAGCCCTTGAAAAAGCCACCATCAGGTATTAAAAAAAGCTTCAGTATTGGCCAACTTAAACCAGCAAAACGGTGGCAGTAG 3702 0.3882 MGFSLSDSSHDQPQLIPQHPSLIQRQRLIAFSGTEWLELRNGNLNHNVFIALNLVMDSQSVNSNTEFRELGSPKASSLGFHKNGNFLSIYGEVEAKHRLLLVQWLSSLIPSLYFPINVTDGELRACLSNGTVLCQILNRLRPGTVNVVSEPDNSLPSHSENVKSFLKALDGMGLQRFEISDLEKGSMKAVVDCLLTLRAKSLQNALADNNHSNSSSPGGNSPFTFPCSPPFNGQPRRVSAGSKLQRVFSSPLVAAEPASLIHHVNHKFHEVFQLKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESLEKRNGEIPHRVACLLRKVTQEIERRMSTQAEHLRTQNNLFKAREEKYQSRIRVLEALASGNRDESEIFASQFQQLMGEKIKEEEKKDEDKSLEISALKQELETAKRTYEVQFSQLEEELLQKVEEYEFQLEELRIQAEKIKEEGRTADEKEIIRLVKEQEENNMEILALKQELETTKKTYEVQCSRLEAEAKDAKAELRHKSQEYEHRLEEIRNKTEKIKEEAKKGDEKEIMRLIKEHEDKKNSEITALKQEFETTKKIYQVQCSQLEAEAKDTKEELRQKSKEYEHRLEELRNNIKELEAASNSKYQKLKMKMSQWQTVIKFHSSSLQNLRLSWESIKQDVKKEQMAYAEECSRLGVNIKSLVQAAENYRVVLAENKKLFNEVQELKGNIRVYCRIRPFLSGKREKQSIVEHIDDNDLVVSNPSKEGKDTHRSFKFNKVFGPTITQAEVYADIQSFIRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFSISTSRSTFIVYEIGVQMVEIYNEQVRDLLSTEGSSKRTLGILTHSQAKGLAVPDASLFPVKSPSDVIKLMDIGLKNRAISATAMNERSSRSHSVVSIHVRGKDLKSGSTQVGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSFSETVSTLKFAERVSGVELGAARSSKDGKDVRELMEQVASMKSTILAKDEEIERLHLHKGSVGSILKQNQKSPSGSIKHHEDDTHRSIVDHIHQNEFLHQPGLSGEDIAKNIAANIQTPGFSDADLDERSSVHSENDVAPPSIGTDSSENSILTEGTKSSDKIEKSKAIPKNVHVVRKLSRTSSITTPTKEPLKKPPSGIKKSFSIGQLKPAKRWQ* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1450 1233 Coils Coil 396 466 - -
Apr2g1450 1233 Pfam Calponin homology (CH) domain 101 198 IPR001715 GO:0005515
Apr2g1450 1233 Gene3D - 396 432 - -
Apr2g1450 1233 Gene3D - 543 586 - -
Apr2g1450 1233 Gene3D - 463 504 - -
Apr2g1450 1233 Gene3D - 90 203 IPR036872 -
Apr2g1450 1233 MobiDBLite consensus disorder prediction 208 238 - -
Apr2g1450 1233 MobiDBLite consensus disorder prediction 1152 1174 - -
Apr2g1450 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 1072 IPR027417 -
Apr2g1450 1233 MobiDBLite consensus disorder prediction 1194 1208 - -
Apr2g1450 1233 ProSiteProfiles Kinesin motor domain profile. 706 1034 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 PRINTS Kinesin heavy chain signature 780 801 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 PRINTS Kinesin heavy chain signature 904 921 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 PRINTS Kinesin heavy chain signature 935 953 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 PRINTS Kinesin heavy chain signature 984 1005 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 476 542 - -
Apr2g1450 1233 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 554 1233 - -
Apr2g1450 1233 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 60 403 - -
Apr2g1450 1233 SUPERFAMILY Calponin-homology domain, CH-domain 96 198 IPR036872 -
Apr2g1450 1233 PANTHER KINESIN-LIKE PROTEIN KLP-3 60 403 - -
Apr2g1450 1233 PANTHER KINESIN-LIKE PROTEIN KLP-3 476 542 - -
Apr2g1450 1233 PANTHER KINESIN-LIKE PROTEIN KLP-3 554 1233 - -
Apr2g1450 1233 ProSiteProfiles Calponin homology (CH) domain profile. 95 202 IPR001715 GO:0005515
Apr2g1450 1233 MobiDBLite consensus disorder prediction 1080 1099 - -
Apr2g1450 1233 Pfam Kinesin motor domain 712 1032 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 Gene3D Kinesin motor domain 647 1036 IPR036961 -
Apr2g1450 1233 Coils Coil 472 545 - -
Apr2g1450 1233 MobiDBLite consensus disorder prediction 208 227 - -
Apr2g1450 1233 SMART ch_5 97 200 IPR001715 GO:0005515
Apr2g1450 1233 SMART kinesin_4 704 1042 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1450 1233 MobiDBLite consensus disorder prediction 1137 1233 - -
Apr2g1450 1233 Coils Coil 566 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1450 Apr-Chr2 20570610 20578564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1450 437 1034 Calmodulin-binding Proteins AT5G65930 33.546 7.85e-73 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1450 K10406 - aprc:113855795 2331.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1450 2 20570610 20578564 Apr2g1450 2 20570610 20578564 ECH
Apr2g1450 2 20570610 20578564 Apr6g1067 6 15353944 15359658 PCT