Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1449 ATGATGACAGACATGAAAGCCGCAGGTGCTTTGGGAGCCAAGACAGCACGAGCATGCGATAGCTGCGTACGTAGACGCGCACGGTGGTTCTGTGCTGCTGACGATGCTTTCCTCTGCCATGGCTGCGACACTTTGGTTCATTCTGCAAACCAGTTAGCAAGCAGGCACGAAAGGGTTCGTCTTCAAACAGCTTCCTCTAAGGTAACAACGTGGCATAGTGGCTTCACACGCAAAGCAAGAACCCCTCGTCACAACAACAACAAGCACTTCGCTCTCCAACAACGTCTCAAAGACCAAGTGCTCTTTAATAACGCTAGTGTTCTTCCCGTTGTGCCAGAACTCGGAGGTGTGGATAATGATGAGATAGAGGAGGAACAGTTGCTGTGTCGTGTGCCTGTGTTCGACCCTTTTGATGCTGAGCCTAGTAGTGCATATGGAATGAAAGAAAATGACATGGAGAGTTTTTCTGATCGGTTTGACATGGATTTCGTTGAATTTGCTGCTGATGTTGAAAGCCTACTTACTGGGGTTGATGAGGATTCAATTAACTATAAGTTGGAAGAAAATGAAGTGGGTGGAGGAGGAAAAAGTGCAATGGTGAGGGTTGAGGATGAAGAAGAACTTGATGATGATATAGCGTGTCATGTGGAGTCGGTTCTTGATATGACAAACGAGGATGTTTTTCGTTGGAATAATATTGATTCGGTGCTTTCAGGTGCACGGGAAGAGAAGGAAAGTGTGGTGGTGGATAATGTTGGAGTGAGTGAAGAAGTGGGAACAAAGAGAGACATATTTTTGAGACTAAATTATGATGAGGTTATTACTGCTTGGGCTAGTCAAGGTTCTTCTCCTTGGAAAAGTGCAATCAACTCCGATTATGACTTATGCTTGGGTTCGAGTGGTGAAAATGGGGAAGTGATCAGAAGCTTAAGAGGGCACTTAGATGGGGGAAGAGAAGCAAGAGTGTCGAGGTACAGAGAGAAGAGAAGGACTCGTTTGTTTGCAAAGAAGATAAGTTCCATGTGCATAAAGAACAAAACAGGAGGATCGGAGTTAGAGAGATGA 1065 0.4526 MMTDMKAAGALGAKTARACDSCVRRRARWFCAADDAFLCHGCDTLVHSANQLASRHERVRLQTASSKVTTWHSGFTRKARTPRHNNNKHFALQQRLKDQVLFNNASVLPVVPELGGVDNDEIEEEQLLCRVPVFDPFDAEPSSAYGMKENDMESFSDRFDMDFVEFAADVESLLTGVDEDSINYKLEENEVGGGGKSAMVRVEDEEELDDDIACHVESVLDMTNEDVFRWNNIDSVLSGAREEKESVVVDNVGVSEEVGTKRDIFLRLNYDEVITAWASQGSSPWKSAINSDYDLCLGSSGENGEVIRSLRGHLDGGREARVSRYREKRRTRLFAKKISSMCIKNKTGGSELER* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1449 354 CDD Bbox1_BBX-like 18 61 - -
Apr2g1449 354 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Apr2g1449 354 SMART bboxneu5 14 61 IPR000315 GO:0008270
Apr2g1449 354 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 338 - -
Apr2g1449 354 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Apr2g1449 354 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1449 Apr-Chr2 20564801 20566688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1449 1 338 C2C2-CO-like Transcription Factor Family AT1G25440 40.295 1.98e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr2g1449 zf-B_box 2.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1449 - - vun:114176987 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1449 2 20564801 20566688 Apr6g1070 6 15376352 15378719 PCT