Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1435 ATGGATTTAGAAGAGAAGTTCCTTGTCAAAGTTTCTGGCGTTCAAAGCCTTTCTTCCAGTGTGCAAAGTACACCGGAAAAAAATGGCCATTCAGATGATGCTTCAAAAAGTTCAGAACTCCTTCAGGAGTTCCTGAAATGTGGTCCGAAGAAGGAGCTTCTTCGAACGTGCTTTGATAAGGACAGAAAAAACATTTTATCAAAAAGCAGGATGACTGAAACTAAGTCAACCAGTAAGATAATTAAGAAACAAGACACAAAAAAAGTTTCAAGTCCCTCCCATCAACCCTCTAGGAAGCAACCCCGAAAGGGTGAAAACCCCACGCGACTCGTACCTTCTCCTGACCAGTCTTCTGATTTTGGCCATTCAGACACTTGGATCTGTAAGAATGTTGCTTGTAGGGCGGTATTGTCTATAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATTTGTCACCATTTTGATGATAACAAAGATCCTAGTCTTTGGTTGGTGTGCACATCTGAATCTACACAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAATGTGCCCTTCAACATGAAAAGGTTGGAGTTATTGATCATGGGCAATTGATGCAACTAGATGGTGGTTATTGTTGTGCGTCCTGTGGTAAAGTTACAGGGATACTTGGATGCTGGAAGAAGCAGCTAAATATAGCAAAAGATGCCCGGCGTGTAGATATACTCTGTTACAGGATATATTTGAGCTACAGGCTCCTGGACGGAACTTCAAAATTTAAAGACTTGCATCAAATTGTAGAAGAGGCAAAGGCTAAACTGGAGGCAGAAGTTGGTCCTGCTGATGGGTTTTCTGCCAAGATGGCACGAGGCATTGTCAGCAGACTCCCTATTGCCAGTGATATACAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGACAAGTGGCTGGCTACTGTTTCCAATGTAAATCTGGATTCCACAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTATCAACTTCCTCGGTGAAAATCATTTTAATTGAAATGTCAAATATATGTTCGGAAGCCATTAAGGGATACAAACTTTGGTATTACAAGACTCGGGATGAATCACCCACAAAAGATCCTGTTTCTGTGTTTCCCAAATCTCAGAGGAGGATTTTGATATCCAACCTTTTGCCTTGCACAGAATATACTTTTCGAATTGTATCTTATACCGATATAGGTGACTTGGGTCATTCAGAGGCTAAGTGTTTCACCAAGAGCATCGAGATAATTAGAAACAATCCCACTTCATGTGTTGCTATGAATCATAAAAAAAATAACCTTCTAACTAGGGGCAATTCTTCTGGCTCCAAGATGGACCCCAATGCCACAATGGAAGACTATGGATTTAAGGTTCGTGACCTTGGGAAAATATTGCGTCTTGCTTGGGCTCAGGCACAAGGGTACTTTGAAGAGTTTTGCTGTGCTGATATGAAAAATTGCTGTGGACAAAGTGCTATCGACAAACTTAAAATTCCAGAAGTGAAGTTGCCTTCAGTTTCACGAGGCCTTGATTTAAACGTGGTTTCAGTGCCTGATTTAAATGAAGAGCTAACACCTCCTTTTGAGTGCTCTAGGGATGAAGATAATGGTTGCTCTTTGCTGCTGGCTGTTGAGGCAGATGATGATGCTGCTTCTCATGATCTGGAGAAAAATGGTTTAGCAAGATCGCATGGAAGTGGTGACTCCCAAACCTGGACCCATGGGCCTGCAGGAGAAGTGTCAGCTGTTGACTCTCGCATAGATGTGTGCAGGAAAAGGAAAGCAAGCACAAATGAAGAGACACATGATTGTGACAGCACTTTGATAAATGGTTCTCCTTTACGCATATCTGATGGTTCATGCCCCTTGGATGAAAACTTTGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTAAGGTCGACAGAGCAAGAGCGCAGGGTGGTTAATACCTTCATTCAAACCCTTATTGATGATCCAAGTAGTTTGGCAGGACAACTGGTTGACTCTTTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGATTCTGTAATAAAGCTGTGCCATCAAATTAA 2163 0.4179 MDLEEKFLVKVSGVQSLSSSVQSTPEKNGHSDDASKSSELLQEFLKCGPKKELLRTCFDKDRKNILSKSRMTETKSTSKIIKKQDTKKVSSPSHQPSRKQPRKGENPTRLVPSPDQSSDFGHSDTWICKNVACRAVLSIDDTFCRRCSCCICHHFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALQHEKVGVIDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDILCYRIYLSYRLLDGTSKFKDLHQIVEEAKAKLEAEVGPADGFSAKMARGIVSRLPIASDIQKLCSLAIEKADKWLATVSNVNLDSTEGSLPAACKFVFEEVSTSSVKIILIEMSNICSEAIKGYKLWYYKTRDESPTKDPVSVFPKSQRRILISNLLPCTEYTFRIVSYTDIGDLGHSEAKCFTKSIEIIRNNPTSCVAMNHKKNNLLTRGNSSGSKMDPNATMEDYGFKVRDLGKILRLAWAQAQGYFEEFCCADMKNCCGQSAIDKLKIPEVKLPSVSRGLDLNVVSVPDLNEELTPPFECSRDEDNGCSLLLAVEADDDAASHDLEKNGLARSHGSGDSQTWTHGPAGEVSAVDSRIDVCRKRKASTNEETHDCDSTLINGSPLRISDGSCPLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCNKAVPSN* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1435 720 MobiDBLite consensus disorder prediction 12 38 - -
Apr2g1435 720 MobiDBLite consensus disorder prediction 68 121 - -
Apr2g1435 720 MobiDBLite consensus disorder prediction 68 89 - -
Apr2g1435 720 Pfam Fibronectin type III domain 333 413 IPR003961 GO:0005515
Apr2g1435 720 MobiDBLite consensus disorder prediction 12 28 - -
Apr2g1435 720 MobiDBLite consensus disorder prediction 568 587 - -
Apr2g1435 720 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Apr2g1435 720 Gene3D Immunoglobulins 313 417 IPR013783 -
Apr2g1435 720 PANTHER VIN3-LIKE PROTEIN 2-RELATED 55 716 IPR044514 GO:0010048|GO:0040029
Apr2g1435 720 CDD FN3 358 411 IPR003961 GO:0005515
Apr2g1435 720 PANTHER VIN3-LIKE PROTEIN 1 55 716 - -
Apr2g1435 720 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Apr2g1435 720 SUPERFAMILY Fibronectin type III 332 411 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1435 Apr-Chr2 20404474 20412827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1435 125 711 PHD Gene Family AT3G24440 49.503 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1435 - - gmx:100816128 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1435 2 20404474 20412827 Apr2g1435 2 20404474 20412827 ECH
Apr2g1435 2 20404474 20412827 Apr6g1094 6 15619270 15627519 PCT