Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1433 ATGGCAAGTCGACTAAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGACTTCTCAAGCTCACACCAAATCGAAGATGTATTAACTGTAACAGCCTGGGACCACAATATGTGTGCACAAATTTTTGGACGTTTGTTTGCACTAACTGTAGTGGATTACATCGAGAATTTACACATCGGGTAAAATCAATTTCAATGGCTAAATTTACTGCACAAGAAGTCAGTGCACTTCAAGAAGGAGGAAATCAGTGTGCAAAAGAAATCTATTTTAAAGAATGGGATCCACAACGTCATTCTTTGCCTGATAGCAGCAATATTGACAGGCTCCGAGATTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTGGTGAGAGGACCTATGACAAACCTCCTAGAGTAAAGGTGGGTGAAAAAGATGATTTCTTTGAAAACAAGAGGATGGAGACATATCTGGGAGGACCTAAAAGCCCTCCATATGAGGACACATATGAACGTCGTTACAGTGACAGTTCTAGTCCCGGTGGAAGAAGTCCTGGATATGATCAAGAAAATAGGCAATATGGTGATCACAAGAGAAGCCCTGGTCGACCTGCAATAATAAATGATTGGCGTCGTGAAGATAGATTTGAGGATGGACGGAAGTTTGAAGATCATAGAAAAACCAATGGAGATAATAAGGTGGAAAGCCAATCTCCTGAGCAAACCAAAGATCCGGATTCTTCCAGCTCACCTGTGATCCGACCTGTTAGAGATATCTTGGGAGAAAGTGTAGTGCCTCTTCGAATCAGTGAACCCCCCAAAACAAACAGTGGACAGGCTGCTAATGGCTCAGCACTCACACAGAGACCTGCATCTTCCAGTTGTTTGGCATCCAGCAATGGAACCCCAGCAAAAGTTAAGATTGAGACTATGAAGAGCCTTATTGATTTTGATGATGATCCTGAACCACCTTTTGCTCCTGCTATTCCTCAAGCCCAGCAAACTACTGTGGCTCAACTTGGGATGCCTGCAAATGCCAGTGATAATAATTGGGCCTCTTTTGATGTTTCTCCTGAGGCAAAAGCATCTCAAGGTCCTTCAAATGTAAATCCACTTGAATCTATGCTGTCTCAGTTGTCAGTACCAGCATCTTTATCTGCTCAAGTTCAAGTTTCTGGAGCCCAAGGATCTGTGACTGGATCAGCTCTTACTTCTGCTGCTGGAGCTCCAATTGTTAACAGCTTCTCGACATTCCCTATCAGTGGTGCTTCAGTAACATCTTCTGGATTGACAACAGCATCATCCCTCAATAGTGATGGACAGTGGGCTAGTTTGCAGTATCAGCAACAACCTCCTTTGTTCCCTGCTGCAGCTAGTCAGCCTACTATACGACAATCTACACCACCAGTAGGTGGAGCTTTGAATAATCAGCCCTGGACTATACCTTCCGTACCATTTGTACAGGGACATCCAAGCACATCAATGCCTCAAGCATCACACCTTGTTTTACAACCTTCTTCAGTGGACATAAAACGTGGTGGAAGAAGTGAACTTCCTGAGGATCTATTCACTGTGAAATATTCATCCTTTCCTGCTCCAGTCCCAGGTTGGCAAATGGGTCCACCACCTAGCATGGGTATCTCAATTCAATATAATAACATGGTGCCCAAGCCAAGTTTTCCACAACCATCAAAATCAACAAATCCATTTGATGTCAACAATGAATCGACTCCAGTGCAAGCCCCAACTTTTCCTTCCATGTCATTGTTACAAGGTGCTCTGCCTAGTGTAACTCCTTCAGCAACAATGCACCCTTCAAACATGGGTAATCCACCCTCATCATCATCATCATATGTATCAGGGTTGCCTCCTCAAGCACACACTCTTGCACCAGGGGCATACATGGGGCAACAAATGCCAACTAACATGCCAATGCCAAGGCATCAAGTAATTGGGAGTTTTGCTACTGAGGGAGCTACTTTTGGCTTCTCAAATCCAGATCAGCAGCCGACTGGTAGGTTGTCAGCCCCTGCTACCCCAAACCCCTTCCCTGCAGGAGGGAACCCATTCGGGTGA 2058 0.4427 MASRLKEDEKNERIIRGLLKLTPNRRCINCNSLGPQYVCTNFWTFVCTNCSGLHREFTHRVKSISMAKFTAQEVSALQEGGNQCAKEIYFKEWDPQRHSLPDSSNIDRLRDFIKHVYVDRRFTGERTYDKPPRVKVGEKDDFFENKRMETYLGGPKSPPYEDTYERRYSDSSSPGGRSPGYDQENRQYGDHKRSPGRPAIINDWRREDRFEDGRKFEDHRKTNGDNKVESQSPEQTKDPDSSSSPVIRPVRDILGESVVPLRISEPPKTNSGQAANGSALTQRPASSSCLASSNGTPAKVKIETMKSLIDFDDDPEPPFAPAIPQAQQTTVAQLGMPANASDNNWASFDVSPEAKASQGPSNVNPLESMLSQLSVPASLSAQVQVSGAQGSVTGSALTSAAGAPIVNSFSTFPISGASVTSSGLTTASSLNSDGQWASLQYQQQPPLFPAAASQPTIRQSTPPVGGALNNQPWTIPSVPFVQGHPSTSMPQASHLVLQPSSVDIKRGGRSELPEDLFTVKYSSFPAPVPGWQMGPPPSMGISIQYNNMVPKPSFPQPSKSTNPFDVNNESTPVQAPTFPSMSLLQGALPSVTPSATMHPSNMGNPPSSSSSYVSGLPPQAHTLAPGAYMGQQMPTNMPMPRHQVIGSFATEGATFGFSNPDQQPTGRLSAPATPNPFPAGGNPFG* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1433 685 MobiDBLite consensus disorder prediction 147 295 - -
Apr2g1433 685 MobiDBLite consensus disorder prediction 184 234 - -
Apr2g1433 685 CDD ArfGap_AGFG 12 122 - -
Apr2g1433 685 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Apr2g1433 685 MobiDBLite consensus disorder prediction 652 685 - -
Apr2g1433 685 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Apr2g1433 685 MobiDBLite consensus disorder prediction 592 637 - -
Apr2g1433 685 MobiDBLite consensus disorder prediction 652 670 - -
Apr2g1433 685 PANTHER ARF GTPASE ACTIVATOR 1 685 - -
Apr2g1433 685 MobiDBLite consensus disorder prediction 552 572 - -
Apr2g1433 685 MobiDBLite consensus disorder prediction 592 617 - -
Apr2g1433 685 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Apr2g1433 685 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Apr2g1433 685 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Apr2g1433 685 MobiDBLite consensus disorder prediction 264 295 - -
Apr2g1433 685 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Apr2g1433 685 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Apr2g1433 685 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Apr2g1433 685 PANTHER ARFGAP/RECO-RELATED 1 685 IPR044820 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1433 Apr-Chr2 20375832 20383338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1433 12 122 C2H2 Transcription Factor Family AT4G21160 33.333 9.73e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1433 - - gmx:100781002 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1433 2 20375832 20383338 Apr9g0138 9 1609154 1614126 ECH
Apr2g1433 2 20375832 20383338 Apr2g1433 2 20375832 20383338 ECH