LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr2g1431	ATGAAGAAGGAAGATTATCCCACCAACCTTACACTCCTCGTTGCATCGTTTCTCACACTCTCCTTCTCCCTCGCAGTCTCAGCCTCCACTCTAGCCAATGGAGCCCTCACCGACGCCCAAGCCATGTACATCAGCCAACGCCAACTTCTCTCCTACAGAGACGAGTTCGGCGACAGAGGAGAGAATGTAACCATAGACCCCTCCCTTGTTTTCGAAAACGACCGCATCAGAAACGCTTATATAGCCTTGCAAGCTTGGAAGCAAGCCATTTTGTCTGATCCTCTGAACCAAACAGCCAATTGGGTCGGATCCAACGTGTGTAACTACAACGGAGTTTATTGTGCACATGCGCTTGATAACCCCAAGATCCGCACCGTGGCTGGCATTGATCTTAACCACGGTGACATTGCCGGTTATTTACCTGAAGAGCTTGGTCTTTTGGTAGATCTTGCACTCTTCCACATTAACTCCAACAGATTCTGCGGCACCGTGCCTCACAAGTTTGAAAGGTTGAAACTACTCTTCGAGTTGGATCTCAGTAACAACAGGTTCGCAGGGAATTTCCCGGAAGTGGTTCTTCGGCTTCCCATGCTCAAGTTCTTGGATCTCAGGTTCAACGAATTCGAAGGTACTGTACCTAGGGAGTTATTCGACAAGGATCTGGACGCCATTTTCATAAACGACAACCGTTTCGTCTTCAATATTCCCGATAACTTCGGTAACTCGCCGGTCTCCGTCATCGTTCTCGCCAACAACAGGTTCCATGGATGCATTCCGGCGAGCTTGGGGAACATGTCTAACCTAAACGAGATCATTCTCATGAACAACCAGTTCCGATCGTGCTTGCCTTCGGAGATAGGGTTGCTGAAGAACCTAACGGTGTTCGACGTCAGCATCAACCAGCTTCTTGGTCCCTTGCCGGATGCCATTGGAAATGCTGTGAGCTTGGAGCAGCTCAACGTGGCAAGCAATTTACTCTCTGGTAAAATTCCTGCTAGTATTTGCATGTTGCCTAAGCTTCAGAACTTCACATATTCTGATAACTTCTTCACCGGTGAGCCTCCGGCATGTCTCGCCTTGCCGGCGTTTGACGACCGGAGGAACTGCTTGCCGGCGAGGCCGTTGCAGAGGCCTCCGGCGCAATGTAAGTCGTTCTTGTCTAAGCCAGTGGATTGTAACTCCTTTGGATGCAAACCTTTTGTTCCTTCCCCTCCTGTAGTGGTGGTTCCCTCGCCACCGCCGACAGTGGCACCTTCACCTCCGTCACCTGGTGTAGCGCCGACACCTCATTCGCCACCGCCAGGAGTGGTGCCTTCGCCTCCATCACCTGGAGTTGTGCCTGCACCTCCTTCGCCACCGCCAGGAGTGGTGCCTTCGCCTCCATCACCTGGAGTTGTGCCTACACCTCCTTCGCCACCGCCAGCGGTCGCACCTTCACCTCCACCATCTGGTTCTACTCCACATTCTCCTCCTCCACCGTACTCTCATTCACCGTCACCACCTGTTTACACTCCACATTCACCTCCTCCTCCGTACGCTCCACCACCTGTTAACACTCCACAACCTCCTCCGCCTTCCCAATTGCCGCCTCCATCATCTACTCCACCAAGTCCACCATCTATGTCTCCACCTTCCCCTACTCCAACGCCACCGTATTGTGTCCGGTCTTCGCCGCCGCCTCCACCAAATTCAGAGCCGCCACATGCTCCTTTGTTCTCTCCACCACCACCTTCACATAACTATAACACACCACCACCACCTCACTCACCGCCTCCACCTGTTTATCCTTATTTGTCTCCACCGCCTCCGCCACATGTCCTTTCACCACCACCTCCATCTCCACCACCTTGTATAGAACCAACACCTTCTCCCACACCTTACCCACCACCACCGGTATATGTTTCTTCACCTCCACCGGTTCAGTATACTCCCCCATCGCCGCCACCTCCTCCGGTTCATTACAGTTCACCACCGCCAGCCCCCGTTCATTACGGTTCGCCACCGCCACCTCCCGTTCACTACGGTTCGCCGCCTCCGCCTCCAGTTTACCCTTCTCCGCCGCCAGGATCCCCGCCTCCTTGTGAAACACCGCCATCTGCATCTCCGCCTCCACCCGTCGTATACTGGAACCCGCCACCTGCCCCAGTATATGAAGGGCCGTTGCCACCTATCTTTGGAGTCCCATACGCATCGCCTCCACCGCCACCTTACTACTGA	2217	0.5386	MKKEDYPTNLTLLVASFLTLSFSLAVSASTLANGALTDAQAMYISQRQLLSYRDEFGDRGENVTIDPSLVFENDRIRNAYIALQAWKQAILSDPLNQTANWVGSNVCNYNGVYCAHALDNPKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFERLKLLFELDLSNNRFAGNFPEVVLRLPMLKFLDLRFNEFEGTVPRELFDKDLDAIFINDNRFVFNIPDNFGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNQFRSCLPSEIGLLKNLTVFDVSINQLLGPLPDAIGNAVSLEQLNVASNLLSGKIPASICMLPKLQNFTYSDNFFTGEPPACLALPAFDDRRNCLPARPLQRPPAQCKSFLSKPVDCNSFGCKPFVPSPPVVVVPSPPPTVAPSPPSPGVAPTPHSPPPGVVPSPPSPGVVPAPPSPPPGVVPSPPSPGVVPTPPSPPPAVAPSPPPSGSTPHSPPPPYSHSPSPPVYTPHSPPPPYAPPPVNTPQPPPPSQLPPPSSTPPSPPSMSPPSPTPTPPYCVRSSPPPPPNSEPPHAPLFSPPPPSHNYNTPPPPHSPPPPVYPYLSPPPPPHVLSPPPPSPPPCIEPTPSPTPYPPPPVYVSSPPPVQYTPPSPPPPPVHYSSPPPAPVHYGSPPPPPVHYGSPPPPPVYPSPPPGSPPPCETPPSASPPPPVVYWNPPPAPVYEGPLPPIFGVPYASPPPPPYY*	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr2g1431	738	PRINTS	Pistil-specific extensin-like signature	428	439	IPR003882	-
	Apr2g1431	738	PRINTS	Pistil-specific extensin-like signature	639	662	IPR003882	-
	Apr2g1431	738	PRINTS	Pistil-specific extensin-like signature	674	692	IPR003882	-
	Apr2g1431	738	Pfam	Leucine rich repeat N-terminal domain	82	114	IPR013210	-
	Apr2g1431	738	Gene3D	Ribonuclease Inhibitor	241	369	IPR032675	-
	Apr2g1431	738	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5	9	436	-	-
	Apr2g1431	738	MobiDBLite	consensus disorder prediction	413	702	-	-
	Apr2g1431	738	Gene3D	Ribonuclease Inhibitor	79	240	IPR032675	-
	Apr2g1431	738	SUPERFAMILY	L domain-like	80	361	-	-
	Apr2g1431	738	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	9	436	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr2g1431	Apr-Chr2	20352781	20355217	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr2g1431	20	404	Leucine-rich Repeat extension Gene Families	AT3G24480	74.352	0.0	611

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr2g1431	-		-	gmx:100814585	691.804